RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 CYYR1Q96J86 154 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 TRAF4Q9BUZ4 470 aaPredicted RBP7.17□□□□□ -1.26
VAPB-206ENST00000520497 WDR13Q9H1Z4 485 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 MED28Q9H204 178 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SAP30LQ9HAJ7 183 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 ZNF286AQ9HBT8 521 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 ING3Q9NXR8 418 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 SLC2A8Q9NY64 477 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 RASL12Q9NYN1 266 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 ELF5Q9UKW6 265 aaPredicted RBP7.17□□□□□ -1.26
VAPB-206ENST00000520497 ANAPC10Q9UM13 185 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 MGAT4AQ9UM21 535 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 ALG5Q9Y673 324 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 ITPR2Q14571 2701 aa7.17□□□□□ -1.26
VAPB-206ENST00000520497 MALRD1Q5VYJ5 2156 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 NOTCH2Q04721 2471 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 hCG_1807616A0A1W2PRN6 198 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 SH2D1BO14796 132 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 DEGS1O15121 323 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 SSNA1O43805 119 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 SSX5O60225 188 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 CREBL2O60519 120 aaPredicted RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 CCNKO75909 580 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 IL5P05113 134 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 FCER2P06734 321 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 GLRA1P23415 457 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 RBMXP38159 391 aaKnown RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 GLP1RP43220 463 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 SNU13P55769 128 aaKnown RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 HOXA4Q00056 320 aaPredicted RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 TLE4Q04727 773 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 GRK1Q15835 563 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 SP5Q6BEB4 398 aaPredicted RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 IDO2Q6ZQW0 420 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 MOB1BQ7L9L4 216 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ZDHHC22Q8N966 263 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 OR51S1Q8NGJ8 323 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 OR11L1Q8NGX0 322 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 GIMAP1Q8WWP7 306 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 HPS1Q92902 700 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 MED30Q96HR3 178 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ST6GALNAC5Q9BVH7 336 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 EGLN1Q9GZT9 426 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 PPA2Q9H2U2 334 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
VAPB-206ENST00000520497 NECAP2Q9NVZ3 263 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 RNF7Q9UBF6 113 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ZNF221Q9UK13 617 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 PPP1R3CQ9UQK1 317 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 NPTNQ9Y639 398 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 FBN2P35556 2912 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ABCA2Q9BZC7 2435 aa7.16□□□□□ -1.26
VAPB-206ENST00000520497 ARHGAP32A7KAX9 2087 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 MED13LQ71F56 2210 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 TRAV24A0A0B4J272 114 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 KIR2DS1A0A191URI9 304 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 TMEM82A0PJX8 343 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 C7orf66A4D0T2 115 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 IFNL4K9M1U5 179 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 M0QYG6 137 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 OR2H2O95918 312 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 KNG1P01042 644 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 HPXP02790 462 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 CSN2P05814 226 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 IRF2P14316 349 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 ZNF44P15621 663 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 LMO1P25800 156 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 HRH1P35367 487 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 KIR2DS4P43632 304 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 RRAS2P62070 204 aaPredicted RBP7.15□□□□□ -1.26
VAPB-206ENST00000520497 CBX3Q13185 183 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 KIR2DS1Q14954 304 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 PDCD1Q15116 288 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 CDK10Q15131 360 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 SRSF7Q16629 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
VAPB-206ENST00000520497 CD276Q5ZPR3 534 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 FAAP20Q6NZ36 180 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 GLCCI1Q86VQ1 547 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 TGIF2LYQ8IUE0 185 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 OR5AP2Q8NGF4 316 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 PPP1R35Q8TAP8 253 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 SULT4A1Q9BR01 284 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 FAAP24Q9BTP7 215 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 TINAGL1Q9GZM7 467 aaPredicted RBP7.15□□□□□ -1.26
VAPB-206ENST00000520497 OR51J1Q9H342 316 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 PLEKHF2Q9H8W4 249 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 UBTD1Q9HAC8 227 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 DECR2Q9NUI1 292 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 DCAF16Q9NXF7 216 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 ETAA1Q9NY74 926 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 EHFQ9NZC4 300 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 AK3Q9UIJ7 227 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 ZNF222Q9UK12 451 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 POLQO75417 2590 aa7.15□□□□□ -1.26
VAPB-206ENST00000520497 TACC2O95359 2948 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 IGKV1D-17A0A075B6S4 117 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 A0A0A6YYJ9 748 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms