RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 OTOSQ8NHW6 89 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 TRMT10AQ8TBZ6 339 aaKnown RBP4.41□□□□□ -1.7
SPTA1-209ENST00000498708 OR51E1Q8TCB6 317 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 WIPF2Q8TF74 440 aaPredicted RBP4.41□□□□□ -1.7
SPTA1-209ENST00000498708 TFAP2CQ92754 450 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 MYDGFQ969H8 173 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 SDSLQ96GA7 329 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 PRSS22Q9GZN4 317 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 MYLK2Q9H1R3 596 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 MUC13Q9H3R2 512 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 RGCCQ9H4X1 137 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 REEP1Q9H902 201 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 ABCB9Q9NP78 766 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 CMC2Q9NRP2 79 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 ARL8BQ9NVJ2 186 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 USE1Q9NZ43 259 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 BAIAP2Q9UQB8 552 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 PIGLQ9Y2B2 252 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 SAMHD1Q9Y3Z3 626 aaKnown RBP4.41□□□□□ -1.7
SPTA1-209ENST00000498708 LRP12Q9Y561 859 aa4.41□□□□□ -1.7
SPTA1-209ENST00000498708 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.7
SPTA1-209ENST00000498708 TMEM269A0A1B0GVZ9 245 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 FAM230AA0A1W2PPH8 454 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 TCRBV4S1A1TA0A5B7 111 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 FAM172BPA6NC97 362 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 MAGEA13PA6NCF6 341 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ANKRD65E5RJM6 399 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 DENRO43583 198 aaKnown RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 DUS4LO95620 317 aaKnown RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 TK1P04183 234 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CALCBP10092 127 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 PAICSP22234 425 aaKnown RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 PRDX6P30041 224 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 AP2S1P53680 142 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 OR12D2P58182 307 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 GINS1Q14691 196 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ODF4Q2M2E3 257 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CEACAM21Q3KPI0 293 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF684Q5T5D7 378 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 TMEM236Q5W0B7 351 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 PLEKHG7Q6ZR37 379 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CENPVQ7Z7K6 275 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ANGPTL5Q86XS5 388 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CPOQ8IVL8 374 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 PGAM4Q8N0Y7 254 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.4□□□□□ -1.71
SPTA1-209ENST00000498708 POC1AQ8NBT0 407 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 OR5A2Q8NGI9 324 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 OR13D1Q8NGV5 346 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 OR5K1Q8NHB7 308 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 NDNFQ8TB73 568 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 RPS4Y2Q8TD47 263 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 FEVQ99581 238 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 TEAD3Q99594 435 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 CCDC134Q9H6E4 229 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 GPR84Q9NQS5 396 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ACTR3BQ9P1U1 418 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 ENPP5Q9UJA9 477 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 IKZF2Q9UKS7 526 aa4.4□□□□□ -1.71
SPTA1-209ENST00000498708 A0A087X0M5 115 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 A0A1B0GX30 115 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 hCG_1809904A0A1W2PP81 198 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 A0A1W2PPE2 198 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 A0A1W2PR64 198 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 A0A1W2PRV1 198 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 FUOMA2VDF0 154 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 FAM90A8PA6NJQ4 464 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 OR5B21A6NL26 309 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 PRR32B1ATL7 298 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 J3QT63 122 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 GNGT2O14610 69 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 NOS1APO75052 506 aaPredicted RBP4.39□□□□□ -1.71
SPTA1-209ENST00000498708 NRASP01111 189 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 LPLP06858 475 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 HSMCR30P0CW71 290 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 PGA5P0DJD9 388 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 IGHV1-8P0DP01 117 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 PRKACGP22612 351 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 PTBP1P26599 531 aaKnown RBP eCLIP4.39□□□□□ -1.71
SPTA1-209ENST00000498708 CHATP28329 748 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 DUSP1P28562 367 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 DLX6P56179 175 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 ACTA2P62736 377 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 ACTG2P63267 376 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 ACTC1P68032 377 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 ACTA1P68133 377 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 MFGE8Q08431 387 aaPredicted RBP4.39□□□□□ -1.71
SPTA1-209ENST00000498708 APOFQ13790 326 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 SMIM21Q3B7S5 101 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 C2orf76Q3KRA6 126 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 DNAL1Q4LDG9 190 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 ABCA11PQ4W5N1 156 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 OR2T5Q6IEZ7 315 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 C16orf89Q6UX73 402 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 BAIAP2L2Q6UXY1 529 aa4.39□□□□□ -1.71
SPTA1-209ENST00000498708 BCDIN3DQ7Z5W3 292 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms