RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, human

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-219	ENST00000485402	GINS3	Q9BRX5	216 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	CFAP47	Q6ZTR5	3102 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	SPINK2	P20155	84 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	CYB561	P49447	251 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	ERVFRD-1	P60508	538 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	RAB1A	P62820	205 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	CLEC12B	Q2HXU8	276 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	ABHD17B	Q5VST6	288 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	PNRC2	Q9NPJ4	139 aa	Known RBP	12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	GFOD1	Q9NXC2	390 aa		12.84	□□□□□ -0.35
TTC3-219	ENST00000485402	GATC	O43716	136 aa	Known RBP	12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	DHRS3	O75911	302 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	GAMT	Q14353	236 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	PLPPR5	Q32ZL2	321 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	SNAI3	Q3KNW1	292 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	FBXL14	Q8N1E6	418 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	OR2C3	Q8N628	320 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	OR5C1	Q8NGR4	320 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	METTL9	Q9H1A3	318 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	PLA2G3	Q9NZ20	509 aa		12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	STRAP	Q9Y3F4	350 aa	Known RBP	12.83	□□□□□ -0.35
TTC3-219	ENST00000485402	DCHS1	Q96JQ0	3298 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402		M0R135	149 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	TERT	O14746	1132 aa	Known RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	LCAT	P04180	440 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	SUMO3	P55854	103 aa	Predicted RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	RPL23A	P62750	156 aa	Known RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	LIAT1	Q6ZQX7	453 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	OR14L1P	Q8NHC6	308 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	HAS2	Q92819	552 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	ZNF799	Q96GE5	643 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	SYT3	Q9BQG1	590 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	WSB1	Q9Y6I7	421 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402		A0A0G2JMM0	328 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402		A0A1W2PPB8	328 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402		A0A1W2PRS3	328 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	ARGFX	A6NJG6	315 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	ZFP92	A6NM28	416 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	KIR3DP1	A8MWS1	328 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	OR7C1	O76099	320 aa	Predicted RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	LIF	P15018	202 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	GRB2	P62993	217 aa	Known RBP	12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	RAET1L	Q5VY80	246 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	ZNF695	Q8IW36	515 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	MUCL1	Q96DR8	90 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	TP53RK	Q96S44	253 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	NIPSNAP3B	Q9BS92	247 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	LRFN1	Q9P244	771 aa		12.83	□□□□□ -0.36
TTC3-219	ENST00000485402	EPHA1	P21709	976 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	GNRHR	P30968	328 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	NKX2-1	P43699	371 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	RAB11A	P62491	216 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	USF2	Q15853	346 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	GPR157	Q5UAW9	335 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	SLC25A47	Q6Q0C1	308 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	NTNG2	Q96CW9	530 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	SGCZ	Q96LD1	299 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	SUCNR1	Q9BXA5	334 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	TREM2	Q9NZC2	230 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	GNG13	Q9P2W3	67 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	PCSK5	Q92824	1860 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	ZNF407	Q9C0G0	2248 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	AKR1C8P	Q5T2L2	129 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	POC1B	Q8TC44	478 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	ZNF837	Q96EG3	531 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	PROK2	Q9HC23	129 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	PRRC2C	Q9Y520	2896 aa	Known RBP	12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	MSTN	O14793	375 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	HLA-H	P01893	362 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	SOD3	P08294	240 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	PHYHD1	Q5SRE7	291 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	GJC3	Q8NFK1	279 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	RNF138	Q8WVD3	245 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	BORCS8	Q96FH0	119 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	MRGPRX4	Q96LA9	322 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	ZNF385A	Q96PM9	386 aa	Known RBP	12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	ANGPTL4	Q9BY76	406 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	DKKL1	Q9UK85	242 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	ESPL1	Q14674	2120 aa		12.82	□□□□□ -0.36
TTC3-219	ENST00000485402	NKX2-8	O15522	239 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HSPA12A	O43301	675 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BK	O60814	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BJ	P06899	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	TUBG1	P23258	451 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BO	P23527	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BB	P33778	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BD	P58876	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BC	P62807	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST2H2BE	Q16778	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	CCDC54	Q8NEL0	328 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BH	Q93079	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BN	Q99877	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	HIST1H2BM	Q99879	126 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	CHST5	Q9GZS9	411 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	CRLF2	Q9HC73	371 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	ASCL3	Q9NQ33	180 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	DLL3	Q9NYJ7	618 aa		12.81	□□□□□ -0.36
TTC3-219	ENST00000485402	DIDO1	Q9BTC0	2240 aa	Known RBP	12.81	□□□□□ -0.36

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