RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 DNAJB11Q9UBS4 358 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
SEC13-216ENST00000479868 TM4SF5O14894 197 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 PHF1O43189 567 aaPredicted RBP11.07□□□□□ -0.64
SEC13-216ENST00000479868 DEDDO75618 318 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 SCGB1D2O95969 90 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 TK1P04183 234 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 COX5AP20674 150 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 KCNJ3P48549 501 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 PSG7Q13046 419 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 IL13RA2Q14627 380 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 OR2A2Q6IF42 318 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 OR1J1Q8NGS3 322 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 C18orf12Q96KH6 178 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 DLL3Q9NYJ7 618 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 DKK4Q9UBT3 224 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 LSM5Q9Y4Y9 91 aaKnown RBP11.07□□□□□ -0.64
SEC13-216ENST00000479868 ATP23Q9Y6H3 246 aa11.07□□□□□ -0.64
SEC13-216ENST00000479868 IGKV1D-13A0A0B4J2D9 117 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 TRDCB7Z8K6 153 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 CNOT4O95628 575 aaKnown RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 IGKV1-13P0DP09 117 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 HKR1P10072 659 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 CEACAM1P13688 526 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 NAAAQ02083 359 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 TUSC1Q2TAM9 212 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 CCDC71LQ8N9Z2 235 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 WDR31Q8NA23 367 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 SECTM1Q8WVN6 248 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ADAT1Q9BUB4 502 aaKnown RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 KIR2DS1A0A191URI9 304 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 LRP5LA4QPB2 252 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 H0YL77 283 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 MPPED1O15442 326 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 SLC34A2O95436 690 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 RAC2P15153 192 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZNF44P15621 663 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 SELEP16581 610 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 RCC1P18754 421 aaPredicted RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 MPV17P39210 176 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 KIR2DS4P43632 304 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZNF154Q13106 437 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZNF169Q14929 603 aaPredicted RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 KIR2DS1Q14954 304 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZNF818PQ6ZRF7 136 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 EIF4E3Q8N5X7 224 aaKnown RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 TMED6Q8WW62 240 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 GTF3AQ92664 365 aaKnown RBP11.06□□□□□ -0.64
SEC13-216ENST00000479868 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 OR2S2Q9NQN1 319 aa11.06□□□□□ -0.64
SEC13-216ENST00000479868 C3orf85A0A1B0GTC6 90 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 CDIPTO14735 213 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 TNFSF13O75888 250 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 TUSC2O75896 110 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 DIRAS3O95661 229 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 MBPP02686 304 aaPredicted RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 CBR1P16152 277 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 FAM209AQ5JX71 171 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 Q6P435 159 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 MEX3BQ6ZN04 569 aaKnown RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 LDLRAD3Q86YD5 345 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 LGI3Q8N145 548 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 OR52M1Q8NGK5 317 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 IQCF6A8MYZ5 107 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 H7C1Q1 480 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 HOXC12P31275 282 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 ERVK11-1P61568 191 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 RTP5Q14D33 572 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 SPIN3Q5JUX0 258 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 PCSK4Q6UW60 755 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 TBC1D26Q86UD7 250 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 GAPTQ8N292 157 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 SLC35G3Q8N808 338 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 GALNT11Q8NCW6 608 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 PRRX2Q99811 253 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
SEC13-216ENST00000479868 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 NUP50Q9UKX7 468 aa11.05□□□□□ -0.64
SEC13-216ENST00000479868 TRBV6-6A0A0A6YYG2 114 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 A0A1B0GW55 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 ZSCAN5BA6NJL1 495 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 AHRRA9YTQ3 701 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 K7EPK0 472 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DEGS1O15121 323 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 FGF16O43320 207 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 WDR1O75083 606 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4L2P0CJ85 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4L3P0CJ86 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4L4P0CJ87 422 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4L5P0CJ88 424 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1238.3 ms