RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CCDC121Q6ZUS5 278 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 CHST4Q8NCG5 386 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 PHF21AQ96BD5 680 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 MRPL48Q96GC5 212 aaKnown RBP13.23□□□□□ -0.29
PTPRK-208ENST00000392449 KIRREL1Q96J84 757 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 C9orf16Q9BUW7 83 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 FAM192AQ9GZU8 254 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 LIN7BQ9HAP6 207 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 FAM118AQ9NWS6 357 aa13.23□□□□□ -0.29
PTPRK-208ENST00000392449 MEIKINA0A087WXM9 373 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 ZNF729A6NN14 1252 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-208ENST00000392449 BRS3P32247 399 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 MTNR1BP49286 362 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-208ENST00000392449 RAB40BQ12829 278 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 DIAPH2-AS1Q14236 149 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 OR51T1Q8NGJ9 327 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 PLPPR1Q8TBJ4 325 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 SGCDQ92629 289 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 ORAI1Q96D31 301 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 RBM14Q96PK6 669 aaKnown RBP13.22□□□□□ -0.29
PTPRK-208ENST00000392449 GPER1Q99527 375 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
PTPRK-208ENST00000392449 A0A087X0M5 115 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 KBTBD11-OT1A0A1B0GTJ5 212 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 A0A1B0GX30 115 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 XPNPEP2O43895 674 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.3
PTPRK-208ENST00000392449 OR2F2O95006 317 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 ALX3O95076 343 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 ALDOBP05062 364 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CCDC159P0C7I6 412 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CGB3P0DN86 165 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CGB7P0DN87 165 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 IGLL1P15814 213 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 RAB3AP20336 220 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 C9orf152Q5JTZ5 239 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 ZNF529Q6P280 563 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CENPVQ7Z7K6 275 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-208ENST00000392449 RFESDQ8TAC1 157 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CNIH3Q8TBE1 160 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CAPSLQ8WWF8 208 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 Q96MT0 163 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 JAM3Q9BX67 310 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 S100A14Q9HCY8 104 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 INPP5EQ9NRR6 644 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-208ENST00000392449 CALYQ9NYX4 217 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 OR6C3Q9NZP0 311 aa13.21□□□□□ -0.3
PTPRK-208ENST00000392449 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-208ENST00000392449 MPZL2O60487 215 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 CDRT1O95170 752 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
PTPRK-208ENST00000392449 SSTR5P35346 364 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 CEACAM3P40198 252 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 GNG10P50151 68 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 ETV1P50549 477 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 PRRX1P54821 245 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 OR2G6Q5TZ20 316 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 ELP2Q6IA86 826 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 PQLC1Q8N2U9 271 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 OR13C5Q8NGS8 318 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 AKR1E2Q96JD6 320 aa13.2□□□□□ -0.3
PTPRK-208ENST00000392449 RPL36Q9Y3U8 105 aaKnown RBP13.2□□□□□ -0.3
PTPRK-208ENST00000392449 A0A1W2PPE3 182 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 PIN1P1O15428 100 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 HTR3BO95264 441 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 CLIC3O95833 236 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 RSU1Q15404 277 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 RSBN1Q5VWQ0 802 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-208ENST00000392449 FOXB2Q5VYV0 432 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 PXT1Q8NFP0 134 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 OR9G1Q8NH87 305 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 TOMM40LQ969M1 308 aa13.19□□□□□ -0.3
PTPRK-208ENST00000392449 MRPS18AQ9NVS2 196 aaKnown RBP13.19□□□□□ -0.3
PTPRK-208ENST00000392449 H3BUI4 141 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 J3QR06 171 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 IL1AP01583 271 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 SNRNP70P08621 437 aaKnown RBP13.18□□□□□ -0.3
PTPRK-208ENST00000392449 PF4V1P10720 104 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 CD33P20138 364 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 ARHGDIBP52566 201 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 FAM53AQ6NSI3 398 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-208ENST00000392449 DRAM1Q8N682 238 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 RPEQ96AT9 228 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 IDI2-AS1Q9NZ38 188 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 PSG11Q9UQ72 335 aa13.18□□□□□ -0.3
PTPRK-208ENST00000392449 A0A1W2PPI3 338 aa13.17□□□□□ -0.3
PTPRK-208ENST00000392449 MAGEA13PA6NCF6 341 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms