RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ORM2P19652 201 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■□□□□ 9.8
CHD4-201ENST00000357008 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 STARD4Q96DR4 205 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
CHD4-201ENST00000357008 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 SEMA7AO75326 666 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 ACAA1P09110 424 aaPredicted RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 TMIGD3P0DMS9 266 aaPredicted RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 TCL1AP56279 114 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 CXCL2P19875 107 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 EFNB2P52799 333 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 PPP1CAP62136 330 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 SKP2Q13309 424 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 HOGA1Q86XE5 327 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 PSG5Q15238 335 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 RHBDD2Q6NTF9 364 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 TM4SF19Q96DZ7 209 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 DCAF16Q9NXF7 216 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 CHAC2Q8WUX2 184 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 NRIP2Q9BQI9 281 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 PAGE4O60829 102 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 ZNF25P17030 456 aaPredicted RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 MRPS11P82912 194 aaKnown RBP13.06□□□□□ -0.32
CHD4-201ENST00000357008 GGTLC2Q14390 218 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 NSUN5P2Q63ZY6 315 aa13.06□□□□□ -0.32
CHD4-201ENST00000357008 NMBP08949 121 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 OR4P4Q8NGL7 312 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 FZR1Q9UM11 496 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 CTXND1A0A1B0GTU2 59 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 OR2M5A3KFT3 312 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 CYR61O00622 381 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 PRSS1P07477 247 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 SSPNQ14714 243 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 KIAA0100Q14667 2235 aaKnown RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 BGLAPP02818 100 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 PRRX1P54821 245 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 RPL24P83731 157 aaKnown RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 ZAR1Q86SH2 424 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 ONECUT1Q9UBC0 465 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 SCN7AQ01118 1682 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 KLF3P57682 345 aaPredicted RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 RCC2Q9P258 522 aaKnown RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 WASHC3Q9Y3C0 194 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 ADAM11O75078 769 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 ACTL6AO96019 429 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 CSN3P07498 182 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 PRSS12P56730 875 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 EIF3IQ13347 325 aaKnown RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 RGP1Q92546 391 aaPredicted RBP13.05□□□□□ -0.32
CHD4-201ENST00000357008 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
CHD4-201ENST00000357008 PTP4A3O75365 173 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 PMELP40967 661 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 HES7Q9BYE0 225 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 ARRDC1-AS1Q9H2J1 176 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 TNFSF14O43557 240 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 LYZP61626 148 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 ZBTB34Q8NCN2 500 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 MEGF10Q96KG7 1140 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 GAMTQ14353 236 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 CHST5Q9GZS9 411 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 SIRT4Q9Y6E7 314 aaPredicted RBP13.04□□□□□ -0.32
CHD4-201ENST00000357008 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
CHD4-201ENST00000357008 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 VSIG10L2P0DP72 767 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
CHD4-201ENST00000357008 P01737 135 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 DPF1Q92782 380 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 GABRG3Q99928 467 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 CES1P1Q9UKY3 287 aa13.04□□□□□ -0.32
CHD4-201ENST00000357008 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 HELTA6NFD8 242 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 F5H697 171 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 CA11O75493 328 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 HAND1O96004 215 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 HOXA6P31267 233 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 B2MP61769 119 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 ZNF273Q14593 569 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 TMEM251Q8N6I4 163 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 C5orf17Q8NAS9 161 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 TMEM116Q8NCL8 245 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 NRTNQ99748 197 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 KLK13Q9UKR3 277 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 AMMECR1Q9Y4X0 333 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 PITX3O75364 302 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 LYZL6O75951 148 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms