RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PNLIPRP3Q17RR3 467 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 TMEM249Q2WGJ8 235 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 RNASE12Q5GAN4 147 aaKnown RBP17.21■□□□□ 0.35
RTCA-201ENST00000260563 ATPAF1Q5TC12 328 aaPredicted RBP17.21■□□□□ 0.35
RTCA-201ENST00000260563 HACD4Q5VWC8 232 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 OLFML2AQ68BL7 652 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 BRICD5Q6PL45 260 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 ZNF788Q6ZQV5 615 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SUMF2Q8NBJ7 301 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SMIM4Q8WVI0 70 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 GAFA1Q96PS6 74 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SULT4A1Q9BR01 284 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 FAAP24Q9BTP7 215 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 SEBOXQ9HB31 216 aaPredicted RBP17.21■□□□□ 0.35
RTCA-201ENST00000260563 CTSZQ9UBR2 303 aa17.21■□□□□ 0.35
RTCA-201ENST00000260563 MEIOCA2RUB1 952 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 SLC33A1O00400 549 aaPredicted RBP17.21■□□□□ 0.34
RTCA-201ENST00000260563 GSTZ1O43708 216 aaPredicted RBP17.21■□□□□ 0.34
RTCA-201ENST00000260563 WNT2P09544 360 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 LMO1P25800 156 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 PRDX2P32119 198 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 IL13RA1P78552 427 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 BAK1Q16611 211 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 ESCO2Q56NI9 601 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 OR8H2Q8N162 312 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 CD177Q8N6Q3 437 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 FAM216BQ8N7L0 139 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 FCAMRQ8WWV6 532 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 C18orf12Q96KH6 178 aa17.21■□□□□ 0.34
RTCA-201ENST00000260563 MAST4O15021 2626 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 A0A1B0GW55 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 MCRIP1C9JLW8 97 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 SULT1C2O00338 296 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 HSPB6O14558 160 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 SIGLEC5O15389 551 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L2P0CJ85 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L3P0CJ86 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L4P0CJ87 422 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L5P0CJ88 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L6P0CJ89 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L7P0CJ90 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 AMY2BP19961 511 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 GNG2P59768 71 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 SEC61A1P61619 476 aaKnown RBP17.2■□□□□ 0.34
RTCA-201ENST00000260563 GNB2P62879 340 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 GUCA2AQ02747 115 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4L9Q6RFH8 374 aaPredicted RBP17.2■□□□□ 0.34
RTCA-201ENST00000260563 ZNF561Q8N587 486 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 OR52I2Q8NH67 350 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 SDSLQ96GA7 329 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 MED30Q96HR3 178 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 THAP7Q9BT49 309 aaPredicted RBP17.2■□□□□ 0.34
RTCA-201ENST00000260563 DPCDQ9BVM2 203 aaPredicted RBP17.2■□□□□ 0.34
RTCA-201ENST00000260563 SSBP3Q9BWW4 388 aaPredicted RBP17.2■□□□□ 0.34
RTCA-201ENST00000260563 SCPEP1Q9HB40 452 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 DUX4Q9UBX2 424 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 CLN8Q9UBY8 286 aa17.2■□□□□ 0.34
RTCA-201ENST00000260563 UBE2QL1A1L167 161 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 FAM157AC9JC47 383 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 CA11O75493 328 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 UPK1BO75841 260 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 GLAP06280 429 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 CD99P14209 185 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 NPY4RP50391 375 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 COL10A1Q03692 680 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 ARFRP1Q13795 201 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 RBM39Q14498 530 aaKnown RBP17.19■□□□□ 0.34
RTCA-201ENST00000260563 C16orf87Q6PH81 154 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 BPIFB2Q8N4F0 458 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 GPX8Q8TED1 209 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 NUDCD2Q8WVJ2 157 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 TMUB1Q9BVT8 246 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 ABCB10Q9NRK6 738 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 AK3Q9UIJ7 227 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 METRNQ9UJH8 293 aa17.19■□□□□ 0.34
RTCA-201ENST00000260563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.19■□□□□ 0.343e-9■■■■■ 27.6
RTCA-201ENST00000260563 NDUFB3O43676 98 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 LPLP06858 475 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 CD3GP09693 182 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 IL7P13232 177 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 SELLP14151 372 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 GZMKP49863 264 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 DCTN2Q13561 401 aaKnown RBP17.18■□□□□ 0.34
RTCA-201ENST00000260563 PAN3Q58A45 887 aaKnown RBP17.18■□□□□ 0.34
RTCA-201ENST00000260563 LRRC10Q5BKY1 277 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 TRIQKQ629K1 86 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 ASCC1Q8N9N2 400 aaKnown RBP17.18■□□□□ 0.34
RTCA-201ENST00000260563 TMEM185AQ8NFB2 350 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 NEK7Q8TDX7 302 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 MAB21L2Q9Y586 359 aa17.18■□□□□ 0.34
RTCA-201ENST00000260563 MEIS3P1A6NDR6 274 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 A8MXK9 166 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 DVL1O14640 695 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 PSPNO60542 156 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 IGHV4-31P0DP07 118 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 MRPS15P82914 257 aaKnown RBP17.17■□□□□ 0.34
RTCA-201ENST00000260563 WDR25Q64LD2 544 aaPredicted RBP17.17■□□□□ 0.34
RTCA-201ENST00000260563 ZNF841Q6ZN19 808 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 TRAPPC6BQ86SZ2 158 aa17.17■□□□□ 0.34
RTCA-201ENST00000260563 ZNRF1Q8ND25 227 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms