RNA–Protein interactions for RNA: YPL190C

NAB3, Transcript of RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene NAB3, Length 2,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	YPL190C	HLJ1	P48353	224 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	SPC105	P53148	917 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	NPY1	P53164	384 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	HDA1	P53973	706 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	UBX4	P54730	416 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	CEG1	Q01159	459 aa	Predicted RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	ECM9	Q02202	377 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	HOS3	Q02959	697 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	GRX6	Q12438	231 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	CEX1	Q12453	761 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	RAD61	Q99359	647 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	HSP82	P02829	709 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	RPS9B	P05755	195 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	CDC6	P09119	513 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	CAF20	P12962	161 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	RNR3	P21672	869 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	MCM4	P30665	933 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	SMY1	P32364	656 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	RPT3	P33298	428 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	SLA2	P33338	968 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	PXL1	P36166	706 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	RXT2	P38255	430 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	TSL1	P38427	1098 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	YER130C	P39959	443 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	IRC24	P40580	263 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	AIM14	P53109	570 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	PRP42	Q03776	544 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	COG4	Q06096	861 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	ATG33	Q06485	197 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	RCL1	Q08096	367 aa	Predicted RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	CLF1	Q12309	687 aa	Predicted RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	TMA7	Q3E764	64 aa	Known RBP	2.99	□□□□□ -1.93
NAB3	YPL190C	YOL087C	Q99247	1116 aa		2.99	□□□□□ -1.93
NAB3	YPL190C	GLT1	Q12680	2145 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	ATP12	P22135	325 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	BMH1	P29311	267 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	HEM12	P32347	362 aa	Predicted RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	WHI3	P34761	661 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	TOM71	P38825	639 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	RPN3	P40016	523 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	PCI8	P40512	444 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	STU2	P46675	888 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	SDA1	P53313	767 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	MRD1	Q06106	887 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	RSC3	Q06639	885 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	RSB1	Q08417	382 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	ACM1	Q08981	209 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	GET3	Q12154	354 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	AI3	P03877	415 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	CTT1	P06115	562 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	HMG1	P12683	1054 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	VPS1	P21576	704 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	URA1	P28272	314 aa	Predicted RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	YSC84	P32793	468 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	CCZ1	P38273	704 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
NAB3	YPL190C	ERR3	P42222	437 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	ALT1	P52893	592 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	TAD1	P53065	400 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	YGL138C	P53122	345 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	SSL2	Q00578	843 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	RPT6	Q01939	405 aa	Known RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	EAR1	Q03212	550 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	SGD1	Q06132	899 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	ACK1	Q07622	623 aa	Predicted RBP	2.98	□□□□□ -1.93
NAB3	YPL190C	PCL8	Q08966	492 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	ENV7	Q12003	364 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	YOR111W	Q99210	232 aa		2.98	□□□□□ -1.93
NAB3	YPL190C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
NAB3	YPL190C	RAD18	P10862	487 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	ALG1	P16661	449 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	GSY1	P23337	708 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	NAM7	P30771	971 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	CCR4	P31384	837 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	COQ2	P32378	372 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	SPC110	P32380	944 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	MDL2	P33311	773 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	YHL012W	P38709	493 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	CSM2	P40465	213 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	THI6	P41835	540 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	TCB2	P48231	1178 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	INP52	P50942	1183 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	RET3	P53600	189 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	KIN4	Q01919	800 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	ATP25	Q03153	612 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	SKG3	Q06315	1026 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	DSE3	Q08729	430 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	FAP7	Q12055	197 aa	Predicted RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	FOB1	O13329	566 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	SRP54	P20424	541 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	HCA4	P20448	770 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	YKU70	P32807	602 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	FAT1	P38225	669 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	BCD1	P38772	366 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	CCT3	P39077	534 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	AIM21	P40563	679 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	MMM1	P41800	426 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	DUG1	P43616	481 aa	Known RBP	2.97	□□□□□ -1.93
NAB3	YPL190C	RTC4	P53850	401 aa		2.97	□□□□□ -1.93
NAB3	YPL190C	WAR1	Q03631	944 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms