RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	HRR25	P29295	494 aa	Known RBP	4.42	□□□□□ -1.7
TPM1	YNL079C	APL2	P36000	726 aa	Predicted RBP	4.42	□□□□□ -1.7
TPM1	YNL079C	MAL31	P38156	614 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	GID8	P40208	455 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	SET2	P46995	733 aa	Known RBP	4.42	□□□□□ -1.7
TPM1	YNL079C	YGR153W	P48238	217 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	TEX1	P53851	422 aa	Known RBP	4.42	□□□□□ -1.7
TPM1	YNL079C	DLT1	Q04216	342 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	PDS5	Q04264	1277 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	MCM21	Q06675	368 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	TRM13	Q12383	476 aa		4.42	□□□□□ -1.7
TPM1	YNL079C	MET3	P08536	511 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	SSB1	P11484	613 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	ERG4	P25340	473 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	PMI40	P29952	429 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	EFT1	P32324	842 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	TRM2	P33753	639 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	YKL222C	P35995	705 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	AKL1	P38080	1108 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	KTR4	P38131	464 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	YHR112C	P38716	378 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	SSB2	P40150	613 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	MNN11	P46985	422 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	AMA1	P50082	593 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	GPD1	Q00055	391 aa	Known RBP	4.41	□□□□□ -1.7
TPM1	YNL079C	ECM9	Q02202	377 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	GAD1	Q04792	585 aa		4.41	□□□□□ -1.7
TPM1	YNL079C	LAT1	P12695	482 aa	Known RBP	4.4	□□□□□ -1.71
TPM1	YNL079C	CAF20	P12962	161 aa	Known RBP	4.4	□□□□□ -1.71
TPM1	YNL079C	APN2	P38207	520 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	YHR202W	P38887	602 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	HXT6	P39003	570 aa	Known RBP	4.4	□□□□□ -1.71
TPM1	YNL079C	HXT7	P39004	570 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	BEM4	P39011	633 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	NUG1	P40010	520 aa	Known RBP	4.4	□□□□□ -1.71
TPM1	YNL079C	ELO3	P40319	345 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	YIR042C	P40586	236 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	MUP1	P50276	574 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	REC102	Q02721	264 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	ATG11	Q12527	1178 aa		4.4	□□□□□ -1.71
TPM1	YNL079C	EUG1	P32474	517 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	DID4	P36108	232 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	APT2	P36973	181 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	YBR053C	P38235	358 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	HMO1	Q03973	246 aa	Known RBP	4.39	□□□□□ -1.71
TPM1	YNL079C	YLR040C	Q07988	224 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	TMA17	Q12513	150 aa		4.39	□□□□□ -1.71
TPM1	YNL079C	RPS21B	Q3E754	87 aa	Known RBP	4.39	□□□□□ -1.71
TPM1	YNL079C	PYC1	P11154	1178 aa	Known RBP	4.38	□□□□□ -1.71
TPM1	YNL079C	ERG6	P25087	383 aa	Known RBP	4.38	□□□□□ -1.71
TPM1	YNL079C	YKR075C	P36155	307 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	TRZ1	P36159	838 aa	Predicted RBP	4.38	□□□□□ -1.71
TPM1	YNL079C	HOS4	P40480	1083 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	BAP3	P41815	604 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	BFA1	P47113	574 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	YJR120W	P47157	116 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	RNT1	Q02555	471 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	ISA1	Q07821	250 aa	Predicted RBP	4.38	□□□□□ -1.71
TPM1	YNL079C	FRE5	Q08908	694 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	HFI1	Q12060	488 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	KRE5	P22023	1365 aa		4.38	□□□□□ -1.71
TPM1	YNL079C	TUB2	P02557	457 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	ALG7	P07286	448 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	SWI6	P09959	803 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	RPS21A	P0C0V8	87 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	SEC65	P29478	273 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	OAF3	P36023	863 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	YBR071W	P38243	211 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	SUL1	P38359	859 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	LYS9	P38999	446 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	DUG1	P43616	481 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	MTL1	P53214	551 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	KIN4	Q01919	800 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	MAK10	Q02197	733 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	CTK1	Q03957	528 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	YHM2	Q04013	314 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	YLR407W	Q06070	228 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	APM4	Q99186	491 aa		4.37	□□□□□ -1.71
TPM1	YNL079C	HRP1	Q99383	534 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	CFT1	Q06632	1357 aa	Known RBP	4.37	□□□□□ -1.71
TPM1	YNL079C	RNR1	P21524	888 aa	Known RBP	4.36	□□□□□ -1.71
TPM1	YNL079C	MRC1	P25588	1096 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	IMG2	P25642	146 aa	Predicted RBP	4.36	□□□□□ -1.71
TPM1	YNL079C	DAL3	P32459	195 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	GPP2	P40106	250 aa	Known RBP	4.36	□□□□□ -1.71
TPM1	YNL079C	YJL163C	P46996	555 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	SUN4	P53616	420 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	FOL1	P53848	824 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	ADY4	Q05955	493 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	YOL073C	Q08232	322 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	TRE2	Q08693	809 aa		4.36	□□□□□ -1.71
TPM1	YNL079C	PPR1	P07272	904 aa	Predicted RBP	4.35	□□□□□ -1.71
TPM1	YNL079C	YKU70	P32807	602 aa		4.35	□□□□□ -1.71
TPM1	YNL079C	PRS1	P32895	427 aa	Known RBP	4.35	□□□□□ -1.71
TPM1	YNL079C	TOM20	P35180	183 aa		4.35	□□□□□ -1.71
TPM1	YNL079C	GET2	P40056	285 aa		4.35	□□□□□ -1.71
TPM1	YNL079C	YNL195C	P40168	261 aa		4.35	□□□□□ -1.71
TPM1	YNL079C	AIM21	P40563	679 aa		4.35	□□□□□ -1.71
TPM1	YNL079C	NOP9	P47077	666 aa	Known RBP	4.35	□□□□□ -1.71
TPM1	YNL079C	MSE1	P48525	536 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms