RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W TPM1P17536 199 aaKnown RBP5.42□□□□□ -1.54
ROT1YMR200W AAD3P25612 363 aa5.42□□□□□ -1.54
ROT1YMR200W PET309P32522 965 aaPredicted RBP5.42□□□□□ -1.54
ROT1YMR200W YKU70P32807 602 aa5.42□□□□□ -1.54
ROT1YMR200W MUD2P36084 527 aaKnown RBP5.42□□□□□ -1.54
ROT1YMR200W CAF16P43569 289 aa5.42□□□□□ -1.54
ROT1YMR200W RBG2P53295 368 aaKnown RBP5.42□□□□□ -1.54
ROT1YMR200W SKY1Q03656 742 aa5.42□□□□□ -1.54
ROT1YMR200W COG8Q04632 607 aa5.42□□□□□ -1.54
ROT1YMR200W CIA1Q05583 330 aa5.42□□□□□ -1.54
ROT1YMR200W YLR287CQ05881 355 aa5.42□□□□□ -1.54
ROT1YMR200W ECM38Q05902 660 aaPredicted RBP5.42□□□□□ -1.54
ROT1YMR200W AIM39Q08223 395 aa5.42□□□□□ -1.54
ROT1YMR200W GUP2Q08929 609 aa5.42□□□□□ -1.54
ROT1YMR200W YPR027CQ12079 277 aa5.42□□□□□ -1.54
ROT1YMR200W RRG1Q12167 365 aaPredicted RBP5.42□□□□□ -1.54
ROT1YMR200W SCM3Q12334 223 aa5.42□□□□□ -1.54
ROT1YMR200W HMG1P12683 1054 aa5.41□□□□□ -1.54
ROT1YMR200W SPO16P17122 198 aa5.41□□□□□ -1.54
ROT1YMR200W AAC3P18238 307 aa5.41□□□□□ -1.54
ROT1YMR200W CAD1P24813 409 aaKnown RBP5.41□□□□□ -1.54
ROT1YMR200W SED4P25365 1065 aa5.41□□□□□ -1.54
ROT1YMR200W MSH1P25846 959 aa5.41□□□□□ -1.54
ROT1YMR200W DHR2P36009 735 aaPredicted RBP5.41□□□□□ -1.54
ROT1YMR200W CCT3P39077 534 aaKnown RBP5.41□□□□□ -1.54
ROT1YMR200W RAD26P40352 1085 aa5.41□□□□□ -1.54
ROT1YMR200W VTI1Q04338 217 aa5.41□□□□□ -1.54
ROT1YMR200W ATG33Q06485 197 aa5.41□□□□□ -1.54
ROT1YMR200W ISA1Q07821 250 aaPredicted RBP5.41□□□□□ -1.54
ROT1YMR200W FBP1P09201 348 aa5.4□□□□□ -1.54
ROT1YMR200W GFA1P14742 717 aaKnown RBP5.4□□□□□ -1.54
ROT1YMR200W RAD16P31244 790 aa5.4□□□□□ -1.54
ROT1YMR200W EFT1P32324 842 aaKnown RBP5.4□□□□□ -1.54
ROT1YMR200W HOG1P32485 435 aa5.4□□□□□ -1.54
ROT1YMR200W YKL100CP34248 587 aa5.4□□□□□ -1.54
ROT1YMR200W SRP72P38688 640 aaKnown RBP5.4□□□□□ -1.54
ROT1YMR200W TDA3P38758 523 aa5.4□□□□□ -1.54
ROT1YMR200W RET2P43621 546 aa5.4□□□□□ -1.54
ROT1YMR200W PCL10P53124 433 aa5.4□□□□□ -1.54
ROT1YMR200W CNM67P53865 581 aaKnown RBP5.4□□□□□ -1.54
ROT1YMR200W MRPL19P53875 158 aa5.4□□□□□ -1.54
ROT1YMR200W ECM9Q02202 377 aa5.4□□□□□ -1.54
ROT1YMR200W LCD1Q04377 747 aa5.4□□□□□ -1.54
ROT1YMR200W YKU80Q04437 629 aa5.4□□□□□ -1.54
ROT1YMR200W TDA9Q04545 1251 aa5.4□□□□□ -1.54
ROT1YMR200W YDR286CQ05530 114 aa5.4□□□□□ -1.54
ROT1YMR200W RSC3Q06639 885 aa5.4□□□□□ -1.54
ROT1YMR200W YLR040CQ07988 224 aa5.4□□□□□ -1.54
ROT1YMR200W TAH18Q12181 623 aa5.4□□□□□ -1.54
ROT1YMR200W HSP42Q12329 375 aa5.4□□□□□ -1.54
ROT1YMR200W HCA4P20448 770 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W DAL7P21826 554 aa5.39□□□□□ -1.55
ROT1YMR200W CMK1P27466 446 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W SEC21P32074 935 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W DPH2P32461 534 aa5.39□□□□□ -1.55
ROT1YMR200W PAH1P32567 862 aa5.39□□□□□ -1.55
ROT1YMR200W CCT5P40413 562 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W GYP8P43570 497 aa5.39□□□□□ -1.55
ROT1YMR200W CCM1P48237 864 aaPredicted RBP5.39□□□□□ -1.55
ROT1YMR200W UPF3P48412 387 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W HDA1P53973 706 aa5.39□□□□□ -1.55
ROT1YMR200W MOT3P54785 490 aaKnown RBP5.39□□□□□ -1.55
ROT1YMR200W CEG1Q01159 459 aaPredicted RBP5.39□□□□□ -1.55
ROT1YMR200W SYF1Q04048 859 aaPredicted RBP5.39□□□□□ -1.55
ROT1YMR200W ARA2Q04212 335 aa5.39□□□□□ -1.55
ROT1YMR200W YDR338CQ05497 695 aa5.39□□□□□ -1.55
ROT1YMR200W TRM13Q12383 476 aa5.39□□□□□ -1.55
ROT1YMR200W SMC6Q12749 1114 aa5.39□□□□□ -1.55
ROT1YMR200W SER1P33330 395 aaKnown RBP5.38□□□□□ -1.55
ROT1YMR200W SLC1P33333 303 aa5.38□□□□□ -1.55
ROT1YMR200W POP2P39008 433 aa5.38□□□□□ -1.55
ROT1YMR200W YEL068CP39977 110 aa5.38□□□□□ -1.55
ROT1YMR200W NOP16P40007 231 aaKnown RBP5.38□□□□□ -1.55
ROT1YMR200W KAP123P40069 1113 aaKnown RBP5.38□□□□□ -1.55
ROT1YMR200W VHR1P40522 640 aa5.38□□□□□ -1.55
ROT1YMR200W BFA1P47113 574 aa5.38□□□□□ -1.55
ROT1YMR200W YML6P51998 286 aa5.38□□□□□ -1.55
ROT1YMR200W ZIP2P53061 704 aa5.38□□□□□ -1.55
ROT1YMR200W YAP1802P53309 568 aa5.38□□□□□ -1.55
ROT1YMR200W TEP1P53916 434 aa5.38□□□□□ -1.55
ROT1YMR200W ERG5P54781 538 aa5.38□□□□□ -1.55
ROT1YMR200W TAD3Q9URQ3 322 aa5.38□□□□□ -1.55
ROT1YMR200W REC104P33323 182 aa5.37□□□□□ -1.55
ROT1YMR200W MCD4P36051 919 aa5.37□□□□□ -1.55
ROT1YMR200W JEM1P40358 645 aa5.37□□□□□ -1.55
ROT1YMR200W SDP1P40479 209 aa5.37□□□□□ -1.55
ROT1YMR200W YIL108WP40483 696 aaKnown RBP5.37□□□□□ -1.55
ROT1YMR200W SMK1P41808 388 aa5.37□□□□□ -1.55
ROT1YMR200W ASK10P48361 1146 aa5.37□□□□□ -1.55
ROT1YMR200W TAD1P53065 400 aa5.37□□□□□ -1.55
ROT1YMR200W YGR283CP53336 341 aaPredicted RBP5.37□□□□□ -1.55
ROT1YMR200W TIM10P87108 93 aa5.37□□□□□ -1.55
ROT1YMR200W TIM50Q02776 476 aa5.37□□□□□ -1.55
ROT1YMR200W YHM2Q04013 314 aa5.37□□□□□ -1.55
ROT1YMR200W TAF11Q04226 346 aa5.37□□□□□ -1.55
ROT1YMR200W MET7Q08645 548 aa5.37□□□□□ -1.55
ROT1YMR200W PGC1Q08959 321 aa5.37□□□□□ -1.55
ROT1YMR200W RPS21AP0C0V8 87 aaKnown RBP5.36□□□□□ -1.55
ROT1YMR200W MET8P15807 274 aa5.36□□□□□ -1.55
ROT1YMR200W RFA1P22336 621 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms