RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	SSK22	P25390	1331 aa	Predicted RBP	4.22	□□□□□ -1.73
YPT7	YML001W	CDC16	P09798	840 aa		4.22	□□□□□ -1.73
YPT7	YML001W	GAL11	P19659	1081 aa		4.22	□□□□□ -1.73
YPT7	YML001W	YBR053C	P38235	358 aa		4.22	□□□□□ -1.73
YPT7	YML001W	OCA5	P38738	679 aa		4.22	□□□□□ -1.73
YPT7	YML001W	GGA2	P38817	585 aa	Known RBP	4.22	□□□□□ -1.73
YPT7	YML001W	FKH2	P41813	862 aa		4.22	□□□□□ -1.73
YPT7	YML001W	TY4A-J	P47023	414 aa		4.22	□□□□□ -1.73
YPT7	YML001W	STB4	P50104	949 aa		4.22	□□□□□ -1.73
YPT7	YML001W	UBA2	P52488	636 aa		4.22	□□□□□ -1.73
YPT7	YML001W	PEX14	P53112	341 aa		4.22	□□□□□ -1.73
YPT7	YML001W	MLC1	P53141	149 aa		4.22	□□□□□ -1.73
YPT7	YML001W	MUK1	Q02866	612 aa		4.22	□□□□□ -1.73
YPT7	YML001W	FCP1	Q03254	732 aa		4.22	□□□□□ -1.73
YPT7	YML001W	MUS81	Q04149	632 aa	Predicted RBP	4.22	□□□□□ -1.73
YPT7	YML001W	DLT1	Q04216	342 aa		4.22	□□□□□ -1.73
YPT7	YML001W	VMS1	Q04311	632 aa	Known RBP	4.22	□□□□□ -1.73
YPT7	YML001W	TMN2	Q04562	672 aa		4.22	□□□□□ -1.73
YPT7	YML001W	ADY4	Q05955	493 aa		4.22	□□□□□ -1.73
YPT7	YML001W	REH1	Q06709	432 aa		4.22	□□□□□ -1.73
YPT7	YML001W	MCH5	Q08777	521 aa		4.22	□□□□□ -1.73
YPT7	YML001W	ACF2	Q12168	779 aa		4.22	□□□□□ -1.73
YPT7	YML001W	PRC1	P00729	532 aa		4.21	□□□□□ -1.74
YPT7	YML001W	RPL19A	P0CX82	189 aa	Known RBP	4.21	□□□□□ -1.74
YPT7	YML001W	RPL19B	P0CX83	189 aa	Predicted RBP	4.21	□□□□□ -1.74
YPT7	YML001W	SER1	P33330	395 aa	Known RBP	4.21	□□□□□ -1.74
YPT7	YML001W	SPC29	P33419	253 aa		4.21	□□□□□ -1.74
YPT7	YML001W	MFT1	P33441	392 aa	Known RBP	4.21	□□□□□ -1.74
YPT7	YML001W	EBP2	P36049	427 aa	Known RBP	4.21	□□□□□ -1.74
YPT7	YML001W	MIC60	P36112	540 aa		4.21	□□□□□ -1.74
YPT7	YML001W	SIC1	P38634	284 aa		4.21	□□□□□ -1.74
YPT7	YML001W	RSM25	P40496	264 aa		4.21	□□□□□ -1.74
YPT7	YML001W	VID28	P40547	921 aa		4.21	□□□□□ -1.74
YPT7	YML001W	PFA3	P42836	336 aa		4.21	□□□□□ -1.74
YPT7	YML001W	SSY5	P47002	699 aa		4.21	□□□□□ -1.74
YPT7	YML001W	HXT16	P47185	567 aa		4.21	□□□□□ -1.74
YPT7	YML001W	MUP1	P50276	574 aa		4.21	□□□□□ -1.74
YPT7	YML001W	MET7	Q08645	548 aa		4.21	□□□□□ -1.74
YPT7	YML001W	RRI2	Q12348	645 aa		4.21	□□□□□ -1.74
YPT7	YML001W	SNU66	Q12420	587 aa	Predicted RBP	4.21	□□□□□ -1.74
YPT7	YML001W	YOL098C	Q12496	1037 aa		4.21	□□□□□ -1.74
YPT7	YML001W	YBR182C-A	Q8TGU6	64 aa		4.21	□□□□□ -1.74
YPT7	YML001W	YLR415C	O13578	112 aa		4.2	□□□□□ -1.74
YPT7	YML001W	CAF20	P12962	161 aa	Known RBP	4.2	□□□□□ -1.74
YPT7	YML001W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
YPT7	YML001W	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
YPT7	YML001W	AAP1	P37898	856 aa	Known RBP	4.2	□□□□□ -1.74
YPT7	YML001W	SET5	P38890	526 aa	Known RBP	4.2	□□□□□ -1.74
YPT7	YML001W	PZF1	P39933	429 aa		4.2	□□□□□ -1.74
YPT7	YML001W	QRI1	P43123	477 aa	Known RBP	4.2	□□□□□ -1.74
YPT7	YML001W	CTF18	P49956	741 aa		4.2	□□□□□ -1.74
YPT7	YML001W	YGL242C	P53066	181 aa		4.2	□□□□□ -1.74
YPT7	YML001W	HST1	P53685	503 aa		4.2	□□□□□ -1.74
YPT7	YML001W	YMR206W	Q03695	313 aa		4.2	□□□□□ -1.74
YPT7	YML001W	SSP2	Q08646	371 aa		4.2	□□□□□ -1.74
YPT7	YML001W	DUR1,2	P32528	1835 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	SES1	P07284	462 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	TPM1	P17536	199 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	IMP2'	P32351	346 aa		4.19	□□□□□ -1.74
YPT7	YML001W	RPN12	P32496	274 aa		4.19	□□□□□ -1.74
YPT7	YML001W	PRX1	P34227	261 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	KTR3	P38130	404 aa	Predicted RBP	4.19	□□□□□ -1.74
YPT7	YML001W	PPS1	P38148	807 aa		4.19	□□□□□ -1.74
YPT7	YML001W	RKM3	P38222	552 aa		4.19	□□□□□ -1.74
YPT7	YML001W	SAK1	P38990	1142 aa		4.19	□□□□□ -1.74
YPT7	YML001W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
YPT7	YML001W	BDH2	P39713	417 aa		4.19	□□□□□ -1.74
YPT7	YML001W	NUG1	P40010	520 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	YMR147W	P40218	223 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	CIR1	P42940	261 aa		4.19	□□□□□ -1.74
YPT7	YML001W	PIB2	P53191	635 aa		4.19	□□□□□ -1.74
YPT7	YML001W	TIM44	Q01852	431 aa		4.19	□□□□□ -1.74
YPT7	YML001W	YDR514C	Q04408	483 aa		4.19	□□□□□ -1.74
YPT7	YML001W	IMH1	Q06704	911 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	CDC53	Q12018	815 aa	Known RBP	4.19	□□□□□ -1.74
YPT7	YML001W	RIM15	P43565	1770 aa		4.18	□□□□□ -1.74
YPT7	YML001W	SUP35	P05453	685 aa	Known RBP	4.18	□□□□□ -1.74
YPT7	YML001W	NGG1	P32494	702 aa		4.18	□□□□□ -1.74
YPT7	YML001W	SAP190	P36123	1033 aa		4.18	□□□□□ -1.74
YPT7	YML001W	RPS0B	P46654	252 aa	Known RBP	4.18	□□□□□ -1.74
YPT7	YML001W	AMA1	P50082	593 aa		4.18	□□□□□ -1.74
YPT7	YML001W	MAL11	P53048	616 aa		4.18	□□□□□ -1.74
YPT7	YML001W	YNL193W	P53870	558 aa		4.18	□□□□□ -1.74
YPT7	YML001W	NRG1	Q03125	231 aa		4.18	□□□□□ -1.74
YPT7	YML001W	RSC3	Q06639	885 aa		4.18	□□□□□ -1.74
YPT7	YML001W	CPA2	P03965	1118 aa	Known RBP	4.17	□□□□□ -1.74
YPT7	YML001W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YPT7	YML001W	SEC18	P18759	758 aa	Known RBP	4.17	□□□□□ -1.74
YPT7	YML001W	HCA4	P20448	770 aa	Known RBP	4.17	□□□□□ -1.74
YPT7	YML001W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
YPT7	YML001W	YHL017W	P38745	532 aa		4.17	□□□□□ -1.74
YPT7	YML001W	SDS3	P40505	327 aa		4.17	□□□□□ -1.74
YPT7	YML001W	RLP7	P40693	322 aa	Known RBP	4.17	□□□□□ -1.74
YPT7	YML001W	BUD6	P41697	788 aa		4.17	□□□□□ -1.74
YPT7	YML001W	EPL1	P43572	832 aa		4.17	□□□□□ -1.74
YPT7	YML001W	YJL163C	P46996	555 aa		4.17	□□□□□ -1.74
YPT7	YML001W	DAS1	P47005	663 aa		4.17	□□□□□ -1.74
YPT7	YML001W	ENP2	P48234	707 aa	Known RBP	4.17	□□□□□ -1.74
YPT7	YML001W	ZIP2	P53061	704 aa		4.17	□□□□□ -1.74
YPT7	YML001W	SSL2	Q00578	843 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms