RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C LAM5P43560 674 aa12.76□□□□□ -0.37
BDF1YLR399C RPT4P53549 437 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C DSL1P53847 754 aa12.76□□□□□ -0.37
BDF1YLR399C SNX3Q08826 162 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C CDC33P07260 213 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C LCB1P25045 558 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C GFD2P25370 566 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C KAR4P25583 335 aa12.76□□□□□ -0.37
BDF1YLR399C SEC21P32074 935 aaKnown RBP12.76□□□□□ -0.37
BDF1YLR399C YGL108CP53139 140 aa12.76□□□□□ -0.37
BDF1YLR399C FMP30Q02883 468 aa12.76□□□□□ -0.37
BDF1YLR399C YPL277CQ08989 487 aa12.76□□□□□ -0.37
BDF1YLR399C TPO5P36029 618 aa12.75□□□□□ -0.37
BDF1YLR399C RRN3P36070 627 aa12.75□□□□□ -0.37
BDF1YLR399C YFH7P43591 353 aa12.75□□□□□ -0.37
BDF1YLR399C FOL1P53848 824 aa12.75□□□□□ -0.37
BDF1YLR399C KTR5P53966 522 aaPredicted RBP12.75□□□□□ -0.37
BDF1YLR399C MMT1Q03218 510 aa12.75□□□□□ -0.37
BDF1YLR399C PUF3Q07807 879 aaKnown RBP RIP-Chip data12.75□□□□□ -0.37not detected
BDF1YLR399C AEP2P22136 580 aa12.74□□□□□ -0.37
BDF1YLR399C VMA22P38784 181 aa12.74□□□□□ -0.37
BDF1YLR399C APE4P38821 490 aa12.74□□□□□ -0.37
BDF1YLR399C ULP2P40537 1034 aaPredicted RBP12.74□□□□□ -0.37
BDF1YLR399C MKT1P40850 830 aaKnown RBP12.74□□□□□ -0.37
BDF1YLR399C FIG4P42837 879 aa12.74□□□□□ -0.37
BDF1YLR399C LEM3P42838 414 aa12.74□□□□□ -0.37
BDF1YLR399C FMP32P43557 207 aa12.74□□□□□ -0.37
BDF1YLR399C ROG3P43602 733 aa12.74□□□□□ -0.37
BDF1YLR399C YGR125WP53273 1036 aa12.74□□□□□ -0.37
BDF1YLR399C UFO1Q04511 668 aa12.74□□□□□ -0.37
BDF1YLR399C ATG26Q06321 1198 aa12.74□□□□□ -0.37
BDF1YLR399C YPQ2Q06328 317 aa12.74□□□□□ -0.37
BDF1YLR399C ASA1Q06822 443 aa12.74□□□□□ -0.37
BDF1YLR399C VAM6Q07468 1049 aa12.74□□□□□ -0.37
BDF1YLR399C TRE1Q08919 783 aa12.74□□□□□ -0.37
BDF1YLR399C ILV1P00927 576 aaKnown RBP12.74□□□□□ -0.37
BDF1YLR399C STE6P12866 1290 aa12.74□□□□□ -0.37
BDF1YLR399C YGR111WP53265 400 aa12.74□□□□□ -0.37
BDF1YLR399C SMP3Q04174 516 aa12.74□□□□□ -0.37
BDF1YLR399C MCM21Q06675 368 aa12.74□□□□□ -0.37
BDF1YLR399C SPE4Q12455 300 aa12.74□□□□□ -0.37
BDF1YLR399C CHS2P14180 963 aa12.73□□□□□ -0.37
BDF1YLR399C GCN3P14741 305 aa12.73□□□□□ -0.37
BDF1YLR399C GYP6P32806 458 aa12.73□□□□□ -0.37
BDF1YLR399C YGL176CP46945 554 aa12.73□□□□□ -0.37
BDF1YLR399C CTR1P49573 406 aa12.73□□□□□ -0.37
BDF1YLR399C MRM2P53123 320 aa12.73□□□□□ -0.37
BDF1YLR399C NOG2P53742 486 aaKnown RBP12.73□□□□□ -0.37
BDF1YLR399C FAP1P53971 965 aa12.73□□□□□ -0.37
BDF1YLR399C AAD16Q02895 342 aa12.73□□□□□ -0.37
BDF1YLR399C BUD22Q04347 519 aaKnown RBP12.73□□□□□ -0.37
BDF1YLR399C ENT1Q12518 454 aa12.73□□□□□ -0.37
BDF1YLR399C SNF3P10870 884 aa12.73□□□□□ -0.37
BDF1YLR399C SFL1P20134 766 aa12.73□□□□□ -0.37
BDF1YLR399C FRT2P39734 528 aa12.73□□□□□ -0.37
BDF1YLR399C VCX1Q99385 411 aa12.73□□□□□ -0.37
BDF1YLR399C MSD1P15179 658 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C POL30P15873 258 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C RPS5P26783 225 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C MUD1P32605 298 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C RPT5P33297 434 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C SBE2P42223 864 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C ESF2P53743 316 aaKnown RBP12.72□□□□□ -0.37
BDF1YLR399C SND1Q04007 877 aa12.72□□□□□ -0.37
BDF1YLR399C YDR222WQ04925 415 aa12.72□□□□□ -0.37
BDF1YLR399C STB3Q12427 513 aa12.72□□□□□ -0.37
BDF1YLR399C TY4B-PA0A0B7P3V8 1104 aa12.71□□□□□ -0.37
BDF1YLR399C ILS1P09436 1072 aaKnown RBP12.71□□□□□ -0.37
BDF1YLR399C HEM1P09950 548 aaPredicted RBP12.71□□□□□ -0.37
BDF1YLR399C PEP12P32854 288 aa12.71□□□□□ -0.37
BDF1YLR399C YDR089WP38966 869 aa12.71□□□□□ -0.37
BDF1YLR399C FTR1P40088 404 aa12.71□□□□□ -0.37
BDF1YLR399C YTA12P40341 825 aa12.71□□□□□ -0.37
BDF1YLR399C LCB2P40970 561 aa12.71□□□□□ -0.37
BDF1YLR399C GGA1Q06336 557 aa12.71□□□□□ -0.37
BDF1YLR399C NOT5Q12514 560 aaPredicted RBP12.71□□□□□ -0.37
BDF1YLR399C ADF1Q2V2Q1 113 aa12.71□□□□□ -0.37
BDF1YLR399C FLO1P32768 1537 aa12.71□□□□□ -0.37
BDF1YLR399C RAD10P06838 210 aa12.71□□□□□ -0.38
BDF1YLR399C REB1P21538 810 aa12.71□□□□□ -0.38
BDF1YLR399C SAN1P22470 610 aa12.71□□□□□ -0.38
BDF1YLR399C ETR1P38071 380 aa12.71□□□□□ -0.38
BDF1YLR399C YEL023CP39992 682 aa12.71□□□□□ -0.38
BDF1YLR399C VPS70P47161 811 aa12.71□□□□□ -0.38
BDF1YLR399C YML6P51998 286 aa12.71□□□□□ -0.38
BDF1YLR399C ADI1Q03677 179 aa12.71□□□□□ -0.38
BDF1YLR399C RAD30Q04049 632 aa12.71□□□□□ -0.38
BDF1YLR399C YET2Q04210 160 aa12.71□□□□□ -0.38
BDF1YLR399C FMP42Q04991 504 aa12.71□□□□□ -0.38
BDF1YLR399C MCH5Q08777 521 aa12.71□□□□□ -0.38
BDF1YLR399C YBR138CP38277 524 aa12.7□□□□□ -0.38
BDF1YLR399C GGA2P38817 585 aaKnown RBP12.7□□□□□ -0.38
BDF1YLR399C SWP82P43554 623 aa12.7□□□□□ -0.38
BDF1YLR399C NMA2P53204 395 aa12.7□□□□□ -0.38
BDF1YLR399C SKI8Q02793 397 aaPredicted RBP12.7□□□□□ -0.38
BDF1YLR399C YDR239CQ03780 787 aa12.7□□□□□ -0.38
BDF1YLR399C SAS4Q04003 481 aa12.7□□□□□ -0.38
BDF1YLR399C FUS2Q05670 677 aa12.7□□□□□ -0.38
BDF1YLR399C YET3Q07451 203 aa12.7□□□□□ -0.38
BDF1YLR399C FAP7Q12055 197 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms