RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	SPP382	Q06411	708 aa	Predicted RBP	6.08	□□□□□ -1.44
RPT1	YKL145W	RSC3	Q06639	885 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	ETT1	Q08421	412 aa	Known RBP	6.08	□□□□□ -1.44
RPT1	YKL145W	RTP1	Q12751	981 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	HIS4	P00815	799 aa	Known RBP	6.08	□□□□□ -1.44
RPT1	YKL145W	HMG1	P12683	1054 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	YKT6	P36015	200 aa	Known RBP	6.08	□□□□□ -1.44
RPT1	YKL145W	MCD4	P36051	919 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	YRO2	P38079	344 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	GAA1	P39012	614 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	HIS6	P40545	261 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	TAF1	P46677	1066 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	YGR153W	P48238	217 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	UBP15	P50101	1230 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	UBA2	P52488	636 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	HEH2	Q03281	663 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	CSM3	Q04659	317 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	ATG33	Q06485	197 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	SLK19	Q08581	821 aa	Known RBP	6.08	□□□□□ -1.44
RPT1	YKL145W	RMP1	Q12530	201 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	YOL087C	Q99247	1116 aa		6.08	□□□□□ -1.44
RPT1	YKL145W	MCM3	P24279	971 aa	Known RBP	6.07	□□□□□ -1.44
RPT1	YKL145W	CDC15	P27636	974 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	CDC12	P32468	407 aa	Known RBP	6.07	□□□□□ -1.44
RPT1	YKL145W	TGL1	P34163	548 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	MRPL16	P38064	232 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	BIT2	P38346	545 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	VAB2	P40003	282 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	CLA4	P48562	842 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	CUE3	P53137	624 aa	Known RBP	6.07	□□□□□ -1.44
RPT1	YKL145W	RTC4	P53850	401 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	SSL2	Q00578	843 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	HAS1	Q03532	505 aa	Known RBP	6.07	□□□□□ -1.44
RPT1	YKL145W	REH1	Q06709	432 aa		6.07	□□□□□ -1.44
RPT1	YKL145W	ILV1	P00927	576 aa	Known RBP	6.06	□□□□□ -1.44
RPT1	YKL145W	ADE8	P04161	214 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	MSS18	P08593	268 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	NPP1	P25353	742 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	GFD2	P25370	566 aa	Known RBP	6.06	□□□□□ -1.44
RPT1	YKL145W	SRO9	P25567	434 aa	Known RBP	6.06	□□□□□ -1.44
RPT1	YKL145W	PER1	P25625	357 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	HOG1	P32485	435 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	SAC6	P32599	642 aa	Known RBP	6.06	□□□□□ -1.44
RPT1	YKL145W	SHP1	P34223	423 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	EMC3	P36039	253 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	YBR238C	P38330	731 aa	Known RBP	6.06	□□□□□ -1.44
RPT1	YKL145W	YJR098C	P47139	656 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	AIM14	P53109	570 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	ADY4	Q05955	493 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	YLH47	Q06493	454 aa		6.06	□□□□□ -1.44
RPT1	YKL145W	MRP10	O75012	95 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	CDC4	P07834	779 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	DBP2	P24783	546 aa	Known RBP	6.05	□□□□□ -1.44
RPT1	YKL145W	BMH1	P29311	267 aa	Known RBP	6.05	□□□□□ -1.44
RPT1	YKL145W	UTR4	P32626	227 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	TOA1	P32773	286 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	NET1	P47035	1189 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	CTR1	P49573	406 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	TAN1	P53072	289 aa	Predicted RBP	6.05	□□□□□ -1.44
RPT1	YKL145W	LIF1	P53150	421 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	YNR063W	P53749	607 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	ECM9	Q02202	377 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	MFM1	Q02783	413 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	YDR338C	Q05497	695 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	SPH1	Q06160	661 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	MET7	Q08645	548 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	GUP2	Q08929	609 aa		6.05	□□□□□ -1.44
RPT1	YKL145W	CFT2	Q12102	859 aa	Predicted RBP	6.05	□□□□□ -1.44
RPT1	YKL145W	RPP1A	P05318	106 aa	Predicted RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	SES1	P07284	462 aa	Known RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	RPL11A	P0C0W9	174 aa	Known RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	VMA2	P16140	517 aa	Known RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	AFT1	P22149	690 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	GSY2	P27472	705 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	MCM10	P32354	571 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	REC104	P33323	182 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	HSE1	P38753	452 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	RRM3	P38766	723 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	MNT3	P40549	630 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	SPO74	P45819	413 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	YGL039W	P53183	348 aa	Known RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	CBK1	P53894	756 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	ORC4	P54791	529 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	RBA50	Q04418	439 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	ENV7	Q12003	364 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	ARP6	Q12509	438 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	SMC6	Q12749	1114 aa		6.04	□□□□□ -1.44
RPT1	YKL145W	RPL11B	Q3E757	174 aa	Predicted RBP	6.04	□□□□□ -1.44
RPT1	YKL145W	FOB1	O13329	566 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	INH1	P01097	85 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	COX11	P19516	300 aa	Known RBP	6.03	□□□□□ -1.44
RPT1	YKL145W	ASH1	P34233	588 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	MCR1	P36060	302 aa	Known RBP	6.03	□□□□□ -1.44
RPT1	YKL145W	YKR018C	P36114	725 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	JNM1	P36224	373 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	ERG7	P38604	731 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	MSC7	P38694	644 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	EMP65	P40085	556 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	QRI7	P43122	407 aa		6.03	□□□□□ -1.44
RPT1	YKL145W	BRE2	P43132	505 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms