RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C ABZ1P37254 787 aaPredicted RBP14.04□□□□□ -0.16
SHU1YHL006C YEL075CP39972 122 aa14.04□□□□□ -0.16
SHU1YHL006C ARO80Q04052 950 aa14.04□□□□□ -0.16
SHU1YHL006C DIS3Q08162 1001 aaKnown RBP14.04□□□□□ -0.16
SHU1YHL006C MDM38Q08179 573 aa14.04□□□□□ -0.16
SHU1YHL006C LPX1Q12405 387 aaKnown RBP14.04□□□□□ -0.16
SHU1YHL006C MPD2Q99316 277 aa14.04□□□□□ -0.16
SHU1YHL006C CDC33P07260 213 aaKnown RBP14.03□□□□□ -0.16
SHU1YHL006C SWE1P32944 819 aa14.03□□□□□ -0.16
SHU1YHL006C NIP100P33420 868 aa14.03□□□□□ -0.16
SHU1YHL006C TRZ1P36159 838 aaPredicted RBP14.03□□□□□ -0.16
SHU1YHL006C YOR387CQ08910 206 aa14.03□□□□□ -0.16
SHU1YHL006C LCB4Q12246 624 aa14.03□□□□□ -0.16
SHU1YHL006C YOL098CQ12496 1037 aa14.03□□□□□ -0.16
SHU1YHL006C RPS9AO13516 197 aaKnown RBP14.02□□□□□ -0.17
SHU1YHL006C JIP3O13555 125 aa14.02□□□□□ -0.17
SHU1YHL006C RGR1P19263 1082 aa14.02□□□□□ -0.17
SHU1YHL006C DOT6P40059 670 aaKnown RBP14.02□□□□□ -0.17
SHU1YHL006C PHO86P46956 311 aa14.02□□□□□ -0.17
SHU1YHL006C VTC4P47075 721 aa14.02□□□□□ -0.17
SHU1YHL006C HFM1P51979 1187 aa14.02□□□□□ -0.17
SHU1YHL006C IMP4P53941 290 aaKnown RBP14.02□□□□□ -0.17
SHU1YHL006C SEG1Q04279 960 aa14.02□□□□□ -0.17
SHU1YHL006C SMC1P32908 1225 aa14.01□□□□□ -0.17
SHU1YHL006C YBR053CP38235 358 aa14.01□□□□□ -0.17
SHU1YHL006C CBR1P38626 284 aaKnown RBP14.01□□□□□ -0.17
SHU1YHL006C RMD8P43620 662 aa14.01□□□□□ -0.17
SHU1YHL006C TAD1P53065 400 aa14.01□□□□□ -0.17
SHU1YHL006C CET1O13297 549 aaPredicted RBP14□□□□□ -0.17
SHU1YHL006C TUP1P16649 713 aa14□□□□□ -0.17
SHU1YHL006C GPI10P30777 616 aa14□□□□□ -0.17
SHU1YHL006C MRP4P32902 394 aa14□□□□□ -0.17
SHU1YHL006C ATG12P38316 186 aa14□□□□□ -0.17
SHU1YHL006C PRK1P40494 810 aa14□□□□□ -0.17
SHU1YHL006C PUS2P53167 370 aa14□□□□□ -0.17
SHU1YHL006C YPR084WQ06821 456 aa14□□□□□ -0.17
SHU1YHL006C RPS3P05750 240 aaKnown RBP13.99□□□□□ -0.17
SHU1YHL006C MSH3P25336 1018 aa13.99□□□□□ -0.17
SHU1YHL006C SEC65P29478 273 aa13.99□□□□□ -0.17
SHU1YHL006C GYP6P32806 458 aa13.99□□□□□ -0.17
SHU1YHL006C MAP2P38174 421 aaKnown RBP13.99□□□□□ -0.17
SHU1YHL006C SSP1P38871 571 aa13.99□□□□□ -0.17
SHU1YHL006C SPG3Q04398 127 aaPredicted RBP13.99□□□□□ -0.17
SHU1YHL006C TAF9Q05027 157 aa13.99□□□□□ -0.17
SHU1YHL006C YPR078CQ06813 372 aa13.99□□□□□ -0.17
SHU1YHL006C REV1P12689 985 aa13.98□□□□□ -0.17
SHU1YHL006C HOM2P13663 365 aaKnown RBP13.98□□□□□ -0.17
SHU1YHL006C STE5P32917 917 aa13.98□□□□□ -0.17
SHU1YHL006C HSP78P33416 811 aa13.98□□□□□ -0.17
SHU1YHL006C ECM13P38195 257 aa13.98□□□□□ -0.17
SHU1YHL006C TIF5P38431 405 aaKnown RBP13.98□□□□□ -0.17
SHU1YHL006C QNS1P38795 714 aaKnown RBP13.98□□□□□ -0.17
SHU1YHL006C STU2P46675 888 aa13.98□□□□□ -0.17
SHU1YHL006C COQ6P53318 479 aa13.98□□□□□ -0.17
SHU1YHL006C TOF2Q02208 771 aa13.98□□□□□ -0.17
SHU1YHL006C PIR3Q03180 325 aa13.98□□□□□ -0.17
SHU1YHL006C APC5Q08683 685 aa13.98□□□□□ -0.17
SHU1YHL006C FLC1Q08967 793 aa13.98□□□□□ -0.17
SHU1YHL006C EMP46Q12396 444 aa13.98□□□□□ -0.17
SHU1YHL006C AEP2P22136 580 aa13.97□□□□□ -0.17
SHU1YHL006C KIN3P22209 435 aa13.97□□□□□ -0.17
SHU1YHL006C EXO5P38289 585 aa13.97□□□□□ -0.17
SHU1YHL006C FMO1P38866 432 aa13.97□□□□□ -0.17
SHU1YHL006C RSM26P47141 266 aa13.97□□□□□ -0.17
SHU1YHL006C CWC24P53769 259 aa13.97□□□□□ -0.17
SHU1YHL006C CAF120P53836 1060 aa13.97□□□□□ -0.17
SHU1YHL006C MSH2P25847 964 aa13.96□□□□□ -0.17
SHU1YHL006C PTC3P34221 468 aaKnown RBP13.96□□□□□ -0.17
SHU1YHL006C SPT23P35210 1082 aa13.96□□□□□ -0.17
SHU1YHL006C SAP190P36123 1033 aa13.96□□□□□ -0.17
SHU1YHL006C GGA2P38817 585 aaKnown RBP13.96□□□□□ -0.17
SHU1YHL006C UFE1P41834 346 aa13.96□□□□□ -0.17
SHU1YHL006C RSC1P53236 928 aa13.96□□□□□ -0.17
SHU1YHL006C YNL144CP53907 740 aa13.96□□□□□ -0.17
SHU1YHL006C MFB1Q04922 465 aa13.96□□□□□ -0.17
SHU1YHL006C YML053CQ04978 212 aa13.96□□□□□ -0.17
SHU1YHL006C MSB2P32334 1306 aa13.95□□□□□ -0.18
SHU1YHL006C IME2P32581 645 aa13.95□□□□□ -0.18
SHU1YHL006C ERG10P41338 398 aaKnown RBP13.95□□□□□ -0.18
SHU1YHL006C HOP2P53187 214 aa13.95□□□□□ -0.18
SHU1YHL006C ENO2P00925 437 aaKnown RBP13.94□□□□□ -0.18
SHU1YHL006C VMA4P22203 233 aaKnown RBP13.94□□□□□ -0.18
SHU1YHL006C VFA1P40080 203 aa13.94□□□□□ -0.18
SHU1YHL006C MMM1P41800 426 aa13.94□□□□□ -0.18
SHU1YHL006C NMA2P53204 395 aa13.94□□□□□ -0.18
SHU1YHL006C NIS1P53939 407 aa13.94□□□□□ -0.18
SHU1YHL006C YPL014WQ02606 381 aa13.94□□□□□ -0.18
SHU1YHL006C ARP7Q12406 477 aa13.94□□□□□ -0.18
SHU1YHL006C CCP1P00431 361 aa13.93□□□□□ -0.18
SHU1YHL006C BI2P03873 423 aa13.93□□□□□ -0.18
SHU1YHL006C BI4P03879 638 aa13.93□□□□□ -0.18
SHU1YHL006C CAP1P28495 268 aaKnown RBP13.93□□□□□ -0.18
SHU1YHL006C PSE1P32337 1089 aaKnown RBP13.93□□□□□ -0.18
SHU1YHL006C HEM14P40012 539 aa13.93□□□□□ -0.18
SHU1YHL006C PMT7Q06644 662 aa13.93□□□□□ -0.18
SHU1YHL006C BI3Q9ZZW7 517 aa13.93□□□□□ -0.18
SHU1YHL006C FPR1P20081 114 aaKnown RBP13.92□□□□□ -0.18
SHU1YHL006C ARL1P38116 183 aaKnown RBP13.92□□□□□ -0.18
SHU1YHL006C PSY2P40164 858 aa13.92□□□□□ -0.18
SHU1YHL006C UME1Q03010 460 aa13.92□□□□□ -0.18
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms