RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C YPR027CQ12079 277 aa3.7□□□□□ -1.82
SWC4YGR002C YKL033W-AQ86ZR7 236 aa3.7□□□□□ -1.82
SWC4YGR002C AEP2P22136 580 aa3.69□□□□□ -1.82
SWC4YGR002C SEC15P22224 910 aa3.69□□□□□ -1.82
SWC4YGR002C PHO11P35842 467 aa3.69□□□□□ -1.82
SWC4YGR002C CBR1P38626 284 aaKnown RBP3.69□□□□□ -1.82
SWC4YGR002C PHO12P38693 467 aa3.69□□□□□ -1.82
SWC4YGR002C GPP2P40106 250 aaKnown RBP3.69□□□□□ -1.82
SWC4YGR002C DUG1P43616 481 aaKnown RBP3.69□□□□□ -1.82
SWC4YGR002C FOL1P53848 824 aa3.69□□□□□ -1.82
SWC4YGR002C THI22Q06490 572 aa3.69□□□□□ -1.82
SWC4YGR002C STP4Q07351 490 aa3.69□□□□□ -1.82
SWC4YGR002C ZRT2Q12436 422 aa3.69□□□□□ -1.82
SWC4YGR002C POM34Q12445 299 aa3.69□□□□□ -1.82
SWC4YGR002C APM4Q99186 491 aa3.69□□□□□ -1.82
SWC4YGR002C TAD3Q9URQ3 322 aa3.69□□□□□ -1.82
SWC4YGR002C SIR3P06701 978 aa3.68□□□□□ -1.82
SWC4YGR002C HCA4P20448 770 aaKnown RBP3.68□□□□□ -1.82
SWC4YGR002C IME1P21190 360 aa3.68□□□□□ -1.82
SWC4YGR002C BCS1P32839 456 aa3.68□□□□□ -1.82
SWC4YGR002C BIT2P38346 545 aa3.68□□□□□ -1.82
SWC4YGR002C PIG2P40187 538 aa3.68□□□□□ -1.82
SWC4YGR002C YIL077CP40508 320 aa3.68□□□□□ -1.82
SWC4YGR002C BUD8P41698 603 aa3.68□□□□□ -1.82
SWC4YGR002C BIT61P47041 543 aa3.68□□□□□ -1.82
SWC4YGR002C RNR4P49723 345 aaKnown RBP3.68□□□□□ -1.82
SWC4YGR002C COG6P53959 839 aa3.68□□□□□ -1.82
SWC4YGR002C KIN82P25341 720 aa3.67□□□□□ -1.82
SWC4YGR002C FEN2P25621 512 aaKnown RBP3.67□□□□□ -1.82
SWC4YGR002C TFC4P33339 1025 aa3.67□□□□□ -1.82
SWC4YGR002C MTH1P35198 433 aa3.67□□□□□ -1.82
SWC4YGR002C SDS3P40505 327 aa3.67□□□□□ -1.82
SWC4YGR002C IES1P43579 692 aa3.67□□□□□ -1.82
SWC4YGR002C NIT2P47016 307 aa3.67□□□□□ -1.82
SWC4YGR002C RFX1P48743 811 aa3.67□□□□□ -1.82
SWC4YGR002C YAP1802P53309 568 aa3.67□□□□□ -1.82
SWC4YGR002C SSL2Q00578 843 aa3.67□□□□□ -1.82
SWC4YGR002C IRC10Q08118 586 aa3.67□□□□□ -1.82
SWC4YGR002C MLH3Q12083 715 aa3.67□□□□□ -1.82
SWC4YGR002C CHS5Q12114 671 aaKnown RBP3.67□□□□□ -1.82
SWC4YGR002C USV1Q12132 391 aa3.67□□□□□ -1.82
SWC4YGR002C CDC26P14724 124 aa3.66□□□□□ -1.82
SWC4YGR002C THR1P17423 357 aaKnown RBP3.66□□□□□ -1.82
SWC4YGR002C CDC43P18898 376 aa3.66□□□□□ -1.82
SWC4YGR002C PRP22P24384 1145 aaKnown RBP3.66□□□□□ -1.82
SWC4YGR002C MRC1P25588 1096 aa3.66□□□□□ -1.82
SWC4YGR002C YPT7P32939 208 aa3.66□□□□□ -1.82
SWC4YGR002C PAF1P38351 445 aa3.66□□□□□ -1.82
SWC4YGR002C PXA1P41909 870 aa3.66□□□□□ -1.82
SWC4YGR002C RPS0BP46654 252 aaKnown RBP3.66□□□□□ -1.82
SWC4YGR002C TAF4P50105 388 aa3.66□□□□□ -1.82
SWC4YGR002C PEX14P53112 341 aa3.66□□□□□ -1.82
SWC4YGR002C FHN1P53279 174 aa3.66□□□□□ -1.82
SWC4YGR002C SKY1Q03656 742 aa3.66□□□□□ -1.82
SWC4YGR002C ATP12P22135 325 aa3.65□□□□□ -1.83
SWC4YGR002C CAB3P36076 571 aa3.65□□□□□ -1.83
SWC4YGR002C COS111P38308 924 aa3.65□□□□□ -1.83
SWC4YGR002C ENP1P38333 483 aaKnown RBP3.65□□□□□ -1.83
SWC4YGR002C YHR033WP38690 423 aa3.65□□□□□ -1.83
SWC4YGR002C SPC105P53148 917 aa3.65□□□□□ -1.83
SWC4YGR002C ECM38Q05902 660 aaPredicted RBP3.65□□□□□ -1.83
SWC4YGR002C YFT2Q06676 274 aa3.65□□□□□ -1.83
SWC4YGR002C MRH1Q12117 320 aaPredicted RBP3.65□□□□□ -1.83
SWC4YGR002C CLF1Q12309 687 aaPredicted RBP3.65□□□□□ -1.83
SWC4YGR002C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SWC4YGR002C KAR1P11927 433 aa3.64□□□□□ -1.83
SWC4YGR002C COX11P19516 300 aaKnown RBP3.64□□□□□ -1.83
SWC4YGR002C KIN3P22209 435 aa3.64□□□□□ -1.83
SWC4YGR002C PLC1P32383 869 aa3.64□□□□□ -1.83
SWC4YGR002C HXT4P32467 576 aa3.64□□□□□ -1.83
SWC4YGR002C SEC6P32844 805 aa3.64□□□□□ -1.83
SWC4YGR002C TOM20P35180 183 aa3.64□□□□□ -1.83
SWC4YGR002C MPS3P47069 682 aa3.64□□□□□ -1.83
SWC4YGR002C SPO1P53541 631 aa3.64□□□□□ -1.83
SWC4YGR002C SMX3P54999 86 aaPredicted RBP3.64□□□□□ -1.83
SWC4YGR002C PPN1Q04119 674 aa3.64□□□□□ -1.83
SWC4YGR002C NGL1Q08213 363 aaKnown RBP3.64□□□□□ -1.83
SWC4YGR002C TUP1P16649 713 aa3.63□□□□□ -1.83
SWC4YGR002C PRP28P23394 588 aa3.63□□□□□ -1.83
SWC4YGR002C DGR2P32330 852 aa3.63□□□□□ -1.83
SWC4YGR002C SET3P36124 751 aa3.63□□□□□ -1.83
SWC4YGR002C PEA2P40091 420 aa3.63□□□□□ -1.83
SWC4YGR002C NDC80P40460 691 aa3.63□□□□□ -1.83
SWC4YGR002C QRI1P43123 477 aaKnown RBP3.63□□□□□ -1.83
SWC4YGR002C PRE4P30657 266 aa3.62□□□□□ -1.83
SWC4YGR002C HEM12P32347 362 aaPredicted RBP3.62□□□□□ -1.83
SWC4YGR002C TDP1P38319 544 aa3.62□□□□□ -1.83
SWC4YGR002C YHR097CP38809 366 aaKnown RBP3.62□□□□□ -1.83
SWC4YGR002C YFR016CP43597 1233 aaKnown RBP3.62□□□□□ -1.83
SWC4YGR002C SLD3P53135 668 aa3.62□□□□□ -1.83
SWC4YGR002C ATG4P53867 494 aa3.62□□□□□ -1.83
SWC4YGR002C TIM50Q02776 476 aa3.62□□□□□ -1.83
SWC4YGR002C NSE5Q03718 556 aa3.62□□□□□ -1.83
SWC4YGR002C PHM6Q05637 104 aa3.62□□□□□ -1.83
SWC4YGR002C ABF1P14164 731 aa3.61□□□□□ -1.83
SWC4YGR002C GFA1P14742 717 aaKnown RBP3.61□□□□□ -1.83
SWC4YGR002C ACO1P19414 778 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SWC4YGR002C FUB1P25659 250 aa3.61□□□□□ -1.83
SWC4YGR002C NTH1P32356 751 aa3.61□□□□□ -1.83
SWC4YGR002C MF(ALPHA)2P32435 120 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms