RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W HOG1P32485 435 aa4.58□□□□□ -1.68
PRE1YER012W SNM1P40993 198 aa4.58□□□□□ -1.68
PRE1YER012W COQ11Q05892 277 aa4.58□□□□□ -1.68
PRE1YER012W MMS22Q06164 1454 aa4.57□□□□□ -1.68
PRE1YER012W PHO8P11491 566 aa4.57□□□□□ -1.68
PRE1YER012W GSY1P23337 708 aa4.57□□□□□ -1.68
PRE1YER012W MNN4P36044 1178 aa4.57□□□□□ -1.68
PRE1YER012W YKR018CP36114 725 aa4.57□□□□□ -1.68
PRE1YER012W REC102Q02721 264 aa4.57□□□□□ -1.68
PRE1YER012W HMO1Q03973 246 aaKnown RBP4.57□□□□□ -1.68
PRE1YER012W POL1P13382 1468 aa4.56□□□□□ -1.68
PRE1YER012W PEX1P24004 1043 aa4.56□□□□□ -1.68
PRE1YER012W FUB1P25659 250 aa4.56□□□□□ -1.68
PRE1YER012W YHR097CP38809 366 aaKnown RBP4.56□□□□□ -1.68
PRE1YER012W BRE5P53741 515 aaKnown RBP4.56□□□□□ -1.68
PRE1YER012W HMG1P12683 1054 aa4.55□□□□□ -1.68
PRE1YER012W STE12P13574 688 aa4.55□□□□□ -1.68
PRE1YER012W ILV6P25605 309 aaKnown RBP4.55□□□□□ -1.68
PRE1YER012W THI4P32318 326 aa4.55□□□□□ -1.68
PRE1YER012W BCS1P32839 456 aa4.55□□□□□ -1.68
PRE1YER012W DOT6P40059 670 aaKnown RBP4.55□□□□□ -1.68
PRE1YER012W RSC8P43609 557 aaKnown RBP4.55□□□□□ -1.68
PRE1YER012W YGR151CP53287 111 aa4.55□□□□□ -1.68
PRE1YER012W MRI1Q06489 411 aaKnown RBP4.55□□□□□ -1.68
PRE1YER012W THI22Q06490 572 aa4.55□□□□□ -1.68
PRE1YER012W AFT2Q08957 416 aa4.55□□□□□ -1.68
PRE1YER012W YLR125WQ12138 136 aa4.55□□□□□ -1.68
PRE1YER012W STU1P38198 1513 aa4.55□□□□□ -1.68
PRE1YER012W NTE1Q04958 1679 aa4.54□□□□□ -1.68
PRE1YER012W KSP1P38691 1029 aaKnown RBP4.54□□□□□ -1.68
PRE1YER012W OCA5P38738 679 aa4.54□□□□□ -1.68
PRE1YER012W GID8P40208 455 aa4.54□□□□□ -1.68
PRE1YER012W RPO21P04050 1733 aaKnown RBP4.54□□□□□ -1.68
PRE1YER012W YOR1P53049 1477 aa4.54□□□□□ -1.68
PRE1YER012W LTE1P07866 1435 aa4.54□□□□□ -1.68
PRE1YER012W MSH2P25847 964 aa4.53□□□□□ -1.68
PRE1YER012W PEX6P33760 1030 aa4.53□□□□□ -1.68
PRE1YER012W GMH1P36125 273 aa4.53□□□□□ -1.68
PRE1YER012W SET2P46995 733 aaKnown RBP4.53□□□□□ -1.68
PRE1YER012W NMA2P53204 395 aa4.53□□□□□ -1.68
PRE1YER012W SPC98P53540 846 aa4.53□□□□□ -1.68
PRE1YER012W HOF1Q05080 669 aa4.53□□□□□ -1.68
PRE1YER012W ATG33Q06485 197 aa4.53□□□□□ -1.68
PRE1YER012W ISA1Q07821 250 aaPredicted RBP4.53□□□□□ -1.68
PRE1YER012W RPN13O13563 156 aa4.52□□□□□ -1.69
PRE1YER012W CIT2P08679 460 aa4.52□□□□□ -1.69
PRE1YER012W PCL2P25693 308 aa4.52□□□□□ -1.69
PRE1YER012W APN2P38207 520 aa4.52□□□□□ -1.69
PRE1YER012W BIT2P38346 545 aa4.52□□□□□ -1.69
PRE1YER012W RFX1P48743 811 aa4.52□□□□□ -1.69
PRE1YER012W VPS36Q06696 566 aa4.52□□□□□ -1.69
PRE1YER012W DIA2Q08496 732 aaPredicted RBP4.52□□□□□ -1.69
PRE1YER012W CHS5Q12114 671 aaKnown RBP4.52□□□□□ -1.69
PRE1YER012W NUP159P40477 1460 aa4.51□□□□□ -1.69
PRE1YER012W HOM2P13663 365 aaKnown RBP4.51□□□□□ -1.69
PRE1YER012W FEN2P25621 512 aaKnown RBP4.51□□□□□ -1.69
PRE1YER012W MUP3P38734 546 aa4.51□□□□□ -1.69
PRE1YER012W YIL077CP40508 320 aa4.51□□□□□ -1.69
PRE1YER012W YDL086WQ07505 273 aa4.51□□□□□ -1.69
PRE1YER012W OSW1Q08692 278 aa4.51□□□□□ -1.69
PRE1YER012W IRC20Q06554 1556 aa4.5□□□□□ -1.69
PRE1YER012W SPP41P38904 1435 aa4.5□□□□□ -1.69
PRE1YER012W SMC4Q12267 1418 aa4.5□□□□□ -1.69
PRE1YER012W YHR202WP38887 602 aa4.5□□□□□ -1.69
PRE1YER012W PAC2P39937 518 aa4.5□□□□□ -1.69
PRE1YER012W MIT1P40002 666 aa4.5□□□□□ -1.69
PRE1YER012W PIG2P40187 538 aa4.5□□□□□ -1.69
PRE1YER012W MPS3P47069 682 aa4.5□□□□□ -1.69
PRE1YER012W VTH1P40438 1549 aa4.5□□□□□ -1.69
PRE1YER012W VTH2P40890 1549 aa4.5□□□□□ -1.69
PRE1YER012W LAM4P38800 1345 aa4.49□□□□□ -1.69
PRE1YER012W TRM732Q03496 1420 aa4.49□□□□□ -1.69
PRE1YER012W SFL1P20134 766 aa4.49□□□□□ -1.69
PRE1YER012W RPA135P22138 1203 aaKnown RBP4.49□□□□□ -1.69
PRE1YER012W VPS34P22543 875 aa4.49□□□□□ -1.69
PRE1YER012W KCC4P25389 1037 aa4.49□□□□□ -1.69
PRE1YER012W ORC2P32833 620 aa4.49□□□□□ -1.69
PRE1YER012W YMC2P38087 329 aa4.49□□□□□ -1.69
PRE1YER012W PCM1P38628 557 aaKnown RBP4.49□□□□□ -1.69
PRE1YER012W SSZ1P38788 538 aaKnown RBP4.49□□□□□ -1.69
PRE1YER012W NUG1P40010 520 aaKnown RBP4.49□□□□□ -1.69
PRE1YER012W NTG2Q08214 380 aa4.49□□□□□ -1.69
PRE1YER012W DCS2Q12123 353 aa4.49□□□□□ -1.69
PRE1YER012W GIN4Q12263 1142 aa4.49□□□□□ -1.69
PRE1YER012W PHO5P00635 467 aa4.48□□□□□ -1.69
PRE1YER012W ERG11P10614 530 aa4.48□□□□□ -1.69
PRE1YER012W SEC6P32844 805 aa4.48□□□□□ -1.69
PRE1YER012W AKL1P38080 1108 aaKnown RBP4.48□□□□□ -1.69
PRE1YER012W FMP30Q02883 468 aa4.48□□□□□ -1.69
PRE1YER012W UGO1Q03327 502 aa4.48□□□□□ -1.69
PRE1YER012W RIM13Q03792 727 aa4.48□□□□□ -1.69
PRE1YER012W YAP7Q08182 245 aa4.48□□□□□ -1.69
PRE1YER012W CLF1Q12309 687 aaPredicted RBP4.48□□□□□ -1.69
PRE1YER012W VPS15P22219 1454 aa4.48□□□□□ -1.69
PRE1YER012W GEA2P39993 1459 aaKnown RBP4.48□□□□□ -1.69
PRE1YER012W TSC11P40061 1430 aa4.47□□□□□ -1.69
PRE1YER012W YMC1P32331 307 aa4.47□□□□□ -1.69
PRE1YER012W PMC1P38929 1173 aaPredicted RBP4.47□□□□□ -1.69
PRE1YER012W KHA1P40309 873 aa4.47□□□□□ -1.69
PRE1YER012W MMS1Q06211 1407 aa4.46□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms