RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	ATP25	Q03153	612 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	FMP27	Q06179	2628 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	RTP1	Q12751	981 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	NCB2	Q92317	146 aa		4.93	□□□□□ -1.62
UBC8	YEL012W	CHS2	P14180	963 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	CDC48	P25694	835 aa	Known RBP	4.92	□□□□□ -1.62
UBC8	YEL012W	MTC2	P34246	357 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	YAP1801	P38856	637 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	RTS1	P38903	757 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	DSS1	P39112	969 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	RSC8	P43609	557 aa	Known RBP	4.92	□□□□□ -1.62
UBC8	YEL012W	SSY1	Q03770	852 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	MRD1	Q06106	887 aa	Known RBP	4.92	□□□□□ -1.62
UBC8	YEL012W	NBA1	Q08229	501 aa	Known RBP	4.92	□□□□□ -1.62
UBC8	YEL012W	RSB1	Q08417	382 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	LPX1	Q12405	387 aa	Known RBP	4.92	□□□□□ -1.62
UBC8	YEL012W	TRM11	Q12463	433 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	RAD61	Q99359	647 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	LAM4	P38800	1345 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	PDR18	P53756	1333 aa		4.92	□□□□□ -1.62
UBC8	YEL012W	NUM1	Q00402	2748 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	HEM1	P09950	548 aa	Predicted RBP	4.91	□□□□□ -1.62
UBC8	YEL012W	MAS2	P11914	482 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	TKL1	P23254	680 aa	Known RBP	4.91	□□□□□ -1.62
UBC8	YEL012W	AIM26	P32858	118 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	MCR1	P36060	302 aa	Known RBP	4.91	□□□□□ -1.62
UBC8	YEL012W	REG2	P38232	338 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	TVP23	P38962	199 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	VPS8	P39702	1274 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	YEN1	P40028	759 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	SPH1	Q06160	661 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	DAP1	Q12091	152 aa		4.91	□□□□□ -1.62
UBC8	YEL012W	TRP3	P00937	484 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	SRD1	P09007	221 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	GSY1	P23337	708 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	MCM4	P30665	933 aa	Known RBP	4.9	□□□□□ -1.63
UBC8	YEL012W	TFC4	P33339	1025 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	KAE1	P36132	386 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	ECM21	P38167	1117 aa	Known RBP	4.9	□□□□□ -1.63
UBC8	YEL012W	AZR1	P50080	613 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	VID30	P53076	958 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	MCM6	P53091	1017 aa	Known RBP	4.9	□□□□□ -1.63
UBC8	YEL012W	MLC1	P53141	149 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	YGR130C	P53278	816 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	HDA1	P53973	706 aa		4.9	□□□□□ -1.63
UBC8	YEL012W	EMI2	Q04409	500 aa	Known RBP	4.9	□□□□□ -1.63
UBC8	YEL012W	ACC1	Q00955	2233 aa	Known RBP	4.89	□□□□□ -1.63
UBC8	YEL012W	SSB1	P11484	613 aa	Known RBP	4.89	□□□□□ -1.63
UBC8	YEL012W	PCL2	P25693	308 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	RPC82	P32349	654 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	SFP1	P32432	683 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	SSB2	P40150	613 aa	Known RBP	4.89	□□□□□ -1.63
UBC8	YEL012W	MGS1	P40151	587 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	HXT16	P47185	567 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	RPS7B	P48164	190 aa	Known RBP	4.89	□□□□□ -1.63
UBC8	YEL012W	INP52	P50942	1183 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	GPG1	P53130	126 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	DAM1	P53267	343 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	SIZ1	Q04195	904 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	RSC3	Q06639	885 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	CDC45	Q08032	650 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	OSW2	Q12202	724 aa		4.89	□□□□□ -1.63
UBC8	YEL012W	GLT1	Q12680	2145 aa	Known RBP	4.88	□□□□□ -1.63
UBC8	YEL012W	SPS1	P08458	490 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	MPH2	P0CD99	609 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	RIT1	P23796	513 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	URK1	P27515	501 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	RFC5	P38251	354 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	FMP10	P40098	244 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	CAF16	P43569	289 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	SAD1	P43589	448 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	MRPS35	P53292	345 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	FOL1	P53848	824 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	VPS30	Q02948	557 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	MSC2	Q03455	724 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	ISA1	Q07821	250 aa	Predicted RBP	4.88	□□□□□ -1.63
UBC8	YEL012W	TAH18	Q12181	623 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	ATG11	Q12527	1178 aa		4.88	□□□□□ -1.63
UBC8	YEL012W	CYC7	P00045	113 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	NUC1	P08466	329 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	YEL1	P34225	687 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	RRP8	P38961	392 aa	Known RBP	4.87	□□□□□ -1.63
UBC8	YEL012W	ENP2	P48234	707 aa	Known RBP	4.87	□□□□□ -1.63
UBC8	YEL012W	HLJ1	P48353	224 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	MET13	P53128	600 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	ORC3	P54790	616 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	RPS15	Q01855	142 aa	Known RBP	4.87	□□□□□ -1.63
UBC8	YEL012W	CDA1	Q06702	301 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	THI73	Q07904	523 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	FKS1	P38631	1876 aa	Known RBP	4.87	□□□□□ -1.63
UBC8	YEL012W	CCH1	P50077	2039 aa		4.87	□□□□□ -1.63
UBC8	YEL012W	MIH1	P23748	554 aa		4.86	□□□□□ -1.63
UBC8	YEL012W	YCL002C	P25565	263 aa		4.86	□□□□□ -1.63
UBC8	YEL012W	APL1	P27351	700 aa		4.86	□□□□□ -1.63
UBC8	YEL012W	URA1	P28272	314 aa	Predicted RBP	4.86	□□□□□ -1.63
UBC8	YEL012W	STO1	P34160	861 aa	Known RBP	4.86	□□□□□ -1.63
UBC8	YEL012W	TOM20	P35180	183 aa		4.86	□□□□□ -1.63
UBC8	YEL012W	MYO3	P36006	1272 aa		4.86	□□□□□ -1.63
UBC8	YEL012W	VPS45	P38932	577 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 418 ms