RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YDR215CQ12240 137 aa2.49□□□□□ -2.01
UBP1YDL122W PRI2P20457 528 aa2.48□□□□□ -2.01
UBP1YDL122W YCK2P23292 546 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W RSA4P25382 515 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W PMI40P29952 429 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W YBR284WP38150 797 aa2.48□□□□□ -2.01
UBP1YDL122W WSC4P38739 605 aa2.48□□□□□ -2.01
UBP1YDL122W TAT2P38967 592 aa2.48□□□□□ -2.01
UBP1YDL122W HXT8P40886 569 aa2.48□□□□□ -2.01
UBP1YDL122W RRP46P53256 223 aaPredicted RBP2.48□□□□□ -2.01
UBP1YDL122W TDA7P53882 636 aaPredicted RBP2.48□□□□□ -2.01
UBP1YDL122W RSC4Q02206 625 aa2.48□□□□□ -2.01
UBP1YDL122W VPS30Q02948 557 aa2.48□□□□□ -2.01
UBP1YDL122W YCG1Q06680 1035 aa2.48□□□□□ -2.01
UBP1YDL122W RPN8Q08723 338 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W DSE3Q08729 430 aa2.48□□□□□ -2.01
UBP1YDL122W MCD1Q12158 566 aa2.48□□□□□ -2.01
UBP1YDL122W PHO8P11491 566 aa2.48□□□□□ -2.01
UBP1YDL122W CDC34P14682 295 aa2.48□□□□□ -2.01
UBP1YDL122W SNF5P18480 905 aa2.48□□□□□ -2.01
UBP1YDL122W KAP122P32767 1081 aa2.48□□□□□ -2.01
UBP1YDL122W NCL1P38205 684 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W PCM1P38628 557 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W SET2P46995 733 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W AIM23P47015 356 aa2.48□□□□□ -2.01
UBP1YDL122W YRB30P53107 440 aaPredicted RBP2.48□□□□□ -2.01
UBP1YDL122W RCR2Q03446 210 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W DAL4Q04895 635 aa2.48□□□□□ -2.01
UBP1YDL122W RPN7Q06103 429 aaKnown RBP2.48□□□□□ -2.01
UBP1YDL122W YLR125WQ12138 136 aa2.48□□□□□ -2.01
UBP1YDL122W MEC1P38111 2368 aa2.47□□□□□ -2.01
UBP1YDL122W YBR056W-AI2HB52 66 aa2.47□□□□□ -2.01
UBP1YDL122W GLN3P18494 730 aa2.47□□□□□ -2.01
UBP1YDL122W PRE9P23638 258 aaKnown RBP2.47□□□□□ -2.01
UBP1YDL122W LDB16P25587 256 aa2.47□□□□□ -2.01
UBP1YDL122W SLN1P39928 1220 aaPredicted RBP2.47□□□□□ -2.01
UBP1YDL122W SPF1P39986 1215 aaKnown RBP2.47□□□□□ -2.01
UBP1YDL122W ALR2P43553 858 aa2.47□□□□□ -2.01
UBP1YDL122W CNM67P53865 581 aaKnown RBP2.47□□□□□ -2.01
UBP1YDL122W TLG2Q08144 397 aa2.47□□□□□ -2.01
UBP1YDL122W OPI10Q08202 246 aa2.47□□□□□ -2.01
UBP1YDL122W LCB4Q12246 624 aa2.47□□□□□ -2.01
UBP1YDL122W RPC31P17890 251 aa2.47□□□□□ -2.01
UBP1YDL122W VMA3P25515 160 aa2.47□□□□□ -2.01
UBP1YDL122W LIP5P32875 414 aa2.47□□□□□ -2.01
UBP1YDL122W HEL1P36113 551 aa2.47□□□□□ -2.01
UBP1YDL122W SAK1P38990 1142 aa2.47□□□□□ -2.01
UBP1YDL122W BTT1P40314 149 aaPredicted RBP2.47□□□□□ -2.01
UBP1YDL122W PRK1P40494 810 aa2.47□□□□□ -2.01
UBP1YDL122W UTP8P53276 713 aaKnown RBP2.47□□□□□ -2.01
UBP1YDL122W YNL092WP53934 400 aa2.47□□□□□ -2.01
UBP1YDL122W ARP4P80428 489 aa2.47□□□□□ -2.01
UBP1YDL122W BNA5Q05979 453 aa2.47□□□□□ -2.01
UBP1YDL122W YCS4Q06156 1176 aa2.47□□□□□ -2.01
UBP1YDL122W NHA1Q99271 985 aa2.47□□□□□ -2.01
UBP1YDL122W REV1P12689 985 aa2.46□□□□□ -2.02
UBP1YDL122W BEM1P29366 551 aa2.46□□□□□ -2.02
UBP1YDL122W THI4P32318 326 aa2.46□□□□□ -2.02
UBP1YDL122W RAD24P32641 659 aa2.46□□□□□ -2.02
UBP1YDL122W NAB3P38996 802 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
UBP1YDL122W YEN1P40028 759 aa2.46□□□□□ -2.02
UBP1YDL122W COQ5P49017 307 aa2.46□□□□□ -2.02
UBP1YDL122W YGR053CP53234 283 aa2.46□□□□□ -2.02
UBP1YDL122W TOF2Q02208 771 aa2.46□□□□□ -2.02
UBP1YDL122W LEA1Q08963 238 aaPredicted RBP2.46□□□□□ -2.02
UBP1YDL122W FAL1Q12099 399 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W APM4Q99186 491 aa2.46□□□□□ -2.02
UBP1YDL122W PGK1P00560 416 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W KIN3P22209 435 aa2.46□□□□□ -2.02
UBP1YDL122W PPH22P23595 377 aa2.46□□□□□ -2.02
UBP1YDL122W PRP22P24384 1145 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W DPH2P32461 534 aa2.46□□□□□ -2.02
UBP1YDL122W TAT1P38085 619 aa2.46□□□□□ -2.02
UBP1YDL122W AMN1P38285 549 aaPredicted RBP2.46□□□□□ -2.02
UBP1YDL122W RRP8P38961 392 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W TYW3P53177 273 aa2.46□□□□□ -2.02
UBP1YDL122W SMA1Q02651 245 aa2.46□□□□□ -2.02
UBP1YDL122W HEL2Q05580 639 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W PHM6Q05637 104 aa2.46□□□□□ -2.02
UBP1YDL122W SMC5Q08204 1093 aa2.46□□□□□ -2.02
UBP1YDL122W RVB2Q12464 471 aaKnown RBP2.46□□□□□ -2.02
UBP1YDL122W SEC39Q12745 709 aa2.46□□□□□ -2.02
UBP1YDL122W ADE3P07245 946 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W GAL11P19659 1081 aa2.45□□□□□ -2.02
UBP1YDL122W CYS3P31373 394 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W IRS4P36115 615 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W YHR020WP38708 688 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W OSH3P38713 996 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W DYS1P38791 387 aa2.45□□□□□ -2.02
UBP1YDL122W RSP5P39940 809 aaKnown RBP2.45□□□□□ -2.02
UBP1YDL122W NTA1P40354 457 aa2.45□□□□□ -2.02
UBP1YDL122W YPS6P40583 537 aa2.45□□□□□ -2.02
UBP1YDL122W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
UBP1YDL122W YNR065CP53751 1116 aa2.45□□□□□ -2.02
UBP1YDL122W YPL109CQ02981 657 aa2.45□□□□□ -2.02
UBP1YDL122W RPL8BP29453 256 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W DUT1P33317 147 aa2.44□□□□□ -2.02
UBP1YDL122W YKL069WP36088 180 aa2.44□□□□□ -2.02
UBP1YDL122W PGM2P37012 569 aaKnown RBP2.44□□□□□ -2.02
UBP1YDL122W ALG14P38242 237 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms