RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR1	YDL060W	YKR011C	Q02209	353 aa		4.19	□□□□□ -1.74
TSR1	YDL060W	TRS130	Q03660	1102 aa		4.19	□□□□□ -1.74
TSR1	YDL060W	ATG33	Q06485	197 aa		4.19	□□□□□ -1.74
TSR1	YDL060W	RSC3	Q06639	885 aa		4.19	□□□□□ -1.74
TSR1	YDL060W	HOM3	P10869	527 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	URA1	P28272	314 aa	Predicted RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	MSP1	P28737	362 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	IMP2'	P32351	346 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	STO1	P34160	861 aa	Known RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	MEP3	P53390	489 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	GTR1	Q00582	310 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	YDR338C	Q05497	695 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	PSK2	Q08217	1101 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	PUS9	Q12069	462 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	TY1B-DR3	Q99231	1755 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	HMG1	P12683	1054 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	COX11	P19516	300 aa	Known RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	KAR4	P25583	335 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	HRR25	P29295	494 aa	Known RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	RSC1	P53236	928 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	NOG2	P53742	486 aa	Known RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	ECM9	Q02202	377 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	ECM38	Q05902	660 aa	Predicted RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	ETT1	Q08421	412 aa	Known RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	CLF1	Q12309	687 aa	Predicted RBP	4.18	□□□□□ -1.74
TSR1	YDL060W	SWM1	Q12379	170 aa		4.18	□□□□□ -1.74
TSR1	YDL060W	TY2B-LR1	P0C2J3	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-F	P0CX63	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-GR2	P0CX64	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-C	P25384	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-DR2	Q03494	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY1B-DR1	Q03855	1755 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-OR1	Q12113	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-DR1	Q12472	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	TY2B-OR2	Q12501	1770 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	PHO81	P17442	1178 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	MCD4	P36051	919 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	SAP190	P36123	1033 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	VTC2	P43585	828 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	YGR153W	P48238	217 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	DAM1	P53267	343 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	YGR283C	P53336	341 aa	Predicted RBP	4.17	□□□□□ -1.74
TSR1	YDL060W	SXM1	Q04175	944 aa	Known RBP	4.17	□□□□□ -1.74
TSR1	YDL060W	CIA1	Q05583	330 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	PDR5	P33302	1511 aa	Known RBP	4.17	□□□□□ -1.74
TSR1	YDL060W	SEC18	P18759	758 aa	Known RBP	4.17	□□□□□ -1.74
TSR1	YDL060W	HOG1	P32485	435 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	RRN3	P36070	627 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	SLD3	P53135	668 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	SUN4	P53616	420 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	COG8	Q04632	607 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	OPY2	Q06810	360 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	PEX19	Q07418	342 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	YOL114C	Q12322	202 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	VPS5	Q92331	675 aa		4.17	□□□□□ -1.74
TSR1	YDL060W	CYS3	P31373	394 aa	Known RBP	4.16	□□□□□ -1.74
TSR1	YDL060W	DID4	P36108	232 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	VPS8	P39702	1274 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	CCT5	P40413	562 aa	Known RBP	4.16	□□□□□ -1.74
TSR1	YDL060W	SDP1	P40479	209 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	MPP10	P47083	593 aa	Known RBP	4.16	□□□□□ -1.74
TSR1	YDL060W	YMR018W	Q04364	514 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	ENV7	Q12003	364 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	VPS15	P22219	1454 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	EDE1	P34216	1381 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	MSM1	P22438	575 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	SER1	P33330	395 aa	Known RBP	4.16	□□□□□ -1.74
TSR1	YDL060W	RKM3	P38222	552 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	EMP65	P40085	556 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	ATP25	Q03153	612 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	SPC19	Q03954	165 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	YDR514C	Q04408	483 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	PEX15	Q08215	383 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	SDH5	Q08230	162 aa		4.16	□□□□□ -1.74
TSR1	YDL060W	NOP58	Q12499	511 aa	Known RBP	4.16	□□□□□ -1.74
TSR1	YDL060W	NUP159	P40477	1460 aa		4.15	□□□□□ -1.74
TSR1	YDL060W	YBT1	P32386	1661 aa		4.15	□□□□□ -1.74
TSR1	YDL060W	RPS21A	P0C0V8	87 aa	Known RBP	4.15	□□□□□ -1.75
TSR1	YDL060W	DAL7	P21826	554 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	PER1	P25625	357 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	YKU70	P32807	602 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	MUM2	P38236	366 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	MSS4	P38994	779 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	TAD1	P53065	400 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	HDA1	P53973	706 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	MOT3	P54785	490 aa	Known RBP	4.15	□□□□□ -1.75
TSR1	YDL060W	CEG1	Q01159	459 aa	Predicted RBP	4.15	□□□□□ -1.75
TSR1	YDL060W	SKY1	Q03656	742 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	HIM1	Q06674	414 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	MET7	Q08645	548 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	MHP1	P43638	1398 aa		4.15	□□□□□ -1.75
TSR1	YDL060W	NGG1	P32494	702 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	NUP120	P35729	1037 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	YPR027C	Q12079	277 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	GEA2	P39993	1459 aa	Known RBP	4.14	□□□□□ -1.75
TSR1	YDL060W	TRM3	Q07527	1436 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	QCR6	P00127	147 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	PRC1	P00729	532 aa		4.14	□□□□□ -1.75
TSR1	YDL060W	EFT1	P32324	842 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms