RNA–Protein interactions for RNA: YCR085W

YCR085W, Transcript of Dubious open reading frame, yeast

Gene YCR085W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR085W	YCR085W	MCH5	Q08777	521 aa		4.72	□□□□□ -1.65
YCR085W	YCR085W	KEL3	Q08979	651 aa	Predicted RBP	4.72	□□□□□ -1.65
YCR085W	YCR085W	ACF2	Q12168	779 aa		4.72	□□□□□ -1.65
YCR085W	YCR085W	RRI2	Q12348	645 aa		4.72	□□□□□ -1.65
YCR085W	YCR085W	FMP27	Q06179	2628 aa		4.72	□□□□□ -1.65
YCR085W	YCR085W	NOT3	P06102	836 aa	Known RBP	4.71	□□□□□ -1.66
YCR085W	YCR085W	PPR1	P07272	904 aa	Predicted RBP	4.71	□□□□□ -1.66
YCR085W	YCR085W	UTR4	P32626	227 aa		4.71	□□□□□ -1.66
YCR085W	YCR085W	CTF8	P38877	133 aa		4.71	□□□□□ -1.66
YCR085W	YCR085W	FUN12	P39730	1002 aa	Known RBP	4.71	□□□□□ -1.66
YCR085W	YCR085W	SDP1	P40479	209 aa		4.71	□□□□□ -1.66
YCR085W	YCR085W	STU2	P46675	888 aa		4.71	□□□□□ -1.66
YCR085W	YCR085W	DAK1	P54838	584 aa	Known RBP	4.71	□□□□□ -1.66
YCR085W	YCR085W	YUR1	P26725	428 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	PBY1	P38254	753 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	YGR125W	P53273	1036 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	YNL193W	P53870	558 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	HEF3	P53978	1044 aa	Known RBP	4.7	□□□□□ -1.66
YCR085W	YCR085W	VPS72	Q03388	795 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	YPR196W	Q06595	470 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	IRC10	Q08118	586 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	RTP1	Q12751	981 aa		4.7	□□□□□ -1.66
YCR085W	YCR085W	ADE8	P04161	214 aa		4.69	□□□□□ -1.66
YCR085W	YCR085W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
YCR085W	YCR085W	RPP0	P05317	312 aa	Known RBP	4.69	□□□□□ -1.66
YCR085W	YCR085W	POX1	P13711	748 aa		4.69	□□□□□ -1.66
YCR085W	YCR085W	SEC21	P32074	935 aa	Known RBP	4.69	□□□□□ -1.66
YCR085W	YCR085W	SGM1	P47166	707 aa		4.69	□□□□□ -1.66
YCR085W	YCR085W	YGL039W	P53183	348 aa	Known RBP	4.69	□□□□□ -1.66
YCR085W	YCR085W	TIM44	Q01852	431 aa		4.69	□□□□□ -1.66
YCR085W	YCR085W	SLD5	Q03406	294 aa		4.69	□□□□□ -1.66
YCR085W	YCR085W	ALG7	P07286	448 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	PRE8	P23639	250 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	CTF13	P35203	478 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	YKL069W	P36088	180 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	YKR018C	P36114	725 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	GRX7	P38068	203 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	FMP10	P40098	244 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	IRR1	P40541	1150 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	MAD1	P40957	749 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	CCM1	P48237	864 aa	Predicted RBP	4.68	□□□□□ -1.66
YCR085W	YCR085W	STB4	P50104	949 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	ART5	P53244	586 aa	Known RBP	4.68	□□□□□ -1.66
YCR085W	YCR085W	ALD6	P54115	500 aa	Known RBP	4.68	□□□□□ -1.66
YCR085W	YCR085W	EMI2	Q04409	500 aa	Known RBP	4.68	□□□□□ -1.66
YCR085W	YCR085W	RPN7	Q06103	429 aa	Known RBP	4.68	□□□□□ -1.66
YCR085W	YCR085W	TRM13	Q12383	476 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	TRM11	Q12463	433 aa		4.68	□□□□□ -1.66
YCR085W	YCR085W	CAN1	P04817	590 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	PIF1	P07271	859 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	TUB3	P09734	445 aa	Known RBP	4.67	□□□□□ -1.66
YCR085W	YCR085W	RAD18	P10862	487 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	URK1	P27515	501 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	TPO2	P53283	614 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	VPS30	Q02948	557 aa		4.67	□□□□□ -1.66
YCR085W	YCR085W	SSL1	Q04673	461 aa	Predicted RBP	4.67	□□□□□ -1.66
YCR085W	YCR085W	FKS1	P38631	1876 aa	Known RBP	4.66	□□□□□ -1.66
YCR085W	YCR085W	CYB2	P00175	591 aa		4.66	□□□□□ -1.66
YCR085W	YCR085W	SAM1	P10659	382 aa	Known RBP	4.66	□□□□□ -1.66
YCR085W	YCR085W	SHP1	P34223	423 aa		4.66	□□□□□ -1.66
YCR085W	YCR085W	ATF1	P40353	525 aa		4.66	□□□□□ -1.66
YCR085W	YCR085W	PEX19	Q07418	342 aa		4.66	□□□□□ -1.66
YCR085W	YCR085W	MCM4	P30665	933 aa	Known RBP	4.65	□□□□□ -1.67
YCR085W	YCR085W	HBS1	P32769	611 aa	Known RBP	4.65	□□□□□ -1.67
YCR085W	YCR085W	DBP7	P36120	742 aa	Known RBP	4.65	□□□□□ -1.67
YCR085W	YCR085W	AZR1	P50080	613 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	CWC24	P53769	259 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	YNL034W	P53963	612 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	HDA1	P53973	706 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	YNL018C	P53976	612 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	LCD1	Q04377	747 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	YMR321C	Q04898	105 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	ERP3	Q12403	225 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	LAM4	P38800	1345 aa		4.65	□□□□□ -1.67
YCR085W	YCR085W	SWI6	P09959	803 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	SAM2	P19358	384 aa	Known RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	PRP9	P19736	530 aa	Known RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	AAR2	P32357	355 aa	Predicted RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	TYE7	P33122	291 aa	Predicted RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	TFC4	P33339	1025 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	MTH1	P35198	433 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	PHO88	P38264	188 aa	Predicted RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	SPF1	P39986	1215 aa	Known RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	SOL4	P53315	255 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	YKR011C	Q02209	353 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	SKG3	Q06315	1026 aa		4.64	□□□□□ -1.67
YCR085W	YCR085W	ISA1	Q07821	250 aa	Predicted RBP	4.64	□□□□□ -1.67
YCR085W	YCR085W	MET3	P08536	511 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	PPZ1	P26570	692 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	CHS3	P29465	1165 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	TIM23	P32897	222 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	TGL1	P34163	548 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	YRO2	P38079	344 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	TVP23	P38962	199 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	TOK1	P40310	691 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	YTA12	P40341	825 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	DAS1	P47005	663 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	MET13	P53128	600 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	MUK1	Q02866	612 aa		4.63	□□□□□ -1.67
YCR085W	YCR085W	TMA64	Q04600	565 aa	Known RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 122.2 ms