RNA–Protein interactions for RNA: YBL061C

SKT5, Transcript of Activator of Chs3p (chitin synthase III) during vegetative growth, yeast

Gene SKT5, Length 2,091 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKT5	YBL061C	YLR358C	O13565	187 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	TUB3	P09734	445 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	FAR1	P21268	830 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	KRR1	P25586	316 aa	Predicted RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	POL4	P25615	582 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	SEC21	P32074	935 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	TOD6	P34219	525 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	VPS41	P38959	992 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	SAK1	P38990	1142 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	AVT1	P47082	602 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	MTR3	P48240	250 aa	Predicted RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	PCL10	P53124	433 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	TAP42	Q04372	366 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	RNH1	Q04740	348 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	DBP9	Q06218	594 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	IRC3	Q06683	689 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	YIL002W-A	Q3E7Z5	69 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	NAT1	P12945	854 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	HIR2	P32480	875 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	TIF3	P34167	436 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	LST4	P34239	828 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	UBP13	P38187	747 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	OTU2	P38747	307 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	TDA3	P38758	523 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	MIP6	P38760	659 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	APE4	P38821	490 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
SKT5	YBL061C	SDS3	P40505	327 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	VHR1	P40522	640 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	ENP2	P48234	707 aa	Known RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	PXR1	P53335	271 aa	Predicted RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	PNG1	Q02890	363 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	SPO19	Q03029	223 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	SNZ1	Q03148	297 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	MUS81	Q04149	632 aa	Predicted RBP	2.99	□□□□□ -1.93
SKT5	YBL061C	ARV1	Q06541	321 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	PEX19	Q07418	342 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	GPR1	Q12361	961 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	Q0142	Q9ZZW4	58 aa		2.99	□□□□□ -1.93
SKT5	YBL061C	HNM1	P19807	563 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	RPB4	P20433	221 aa	Predicted RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	TRX2	P22803	104 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	PHO84	P25297	587 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	RNQ1	P25367	405 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	THI80	P35202	319 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	MED8	P38304	223 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	TOM71	P38825	639 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	OAF1	P39720	1047 aa	Predicted RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	YER034W	P40022	185 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	MAM1	P40065	302 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	RIC1	P40395	1056 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	CCT5	P40413	562 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	PFA3	P42836	336 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	LAM5	P43560	674 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	MNN11	P46985	422 aa	Known RBP	2.98	□□□□□ -1.93
SKT5	YBL061C	YGR153W	P48238	217 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	SHE4	P51534	789 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	EXG2	P52911	562 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	ORC4	P54791	529 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	ORM2	Q06144	216 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	GRC3	Q07845	632 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	ENB1	Q08299	606 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	YPL191C	Q08930	360 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	TRM11	Q12463	433 aa		2.98	□□□□□ -1.93
SKT5	YBL061C	FOB1	O13329	566 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	TUF1	P02992	437 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	RED1	P14291	827 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	KAR4	P25583	335 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	AAD3	P25612	363 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	BUD14	P27637	709 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	NUF2	P33895	451 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	DID4	P36108	232 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	RXT2	P38255	430 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	MSS4	P38994	779 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	GCD10	P41814	478 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	DUG1	P43616	481 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	YBP2	P53169	641 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YNL050C	P53952	270 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	ERB1	Q04660	807 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	CSR1	Q06705	408 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	TRE2	Q08693	809 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	SLX4	Q12098	748 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	TMA17	Q12513	150 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YBL111C	Q3E7Y5	667 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YLR415C	O13578	112 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	CTF13	P35203	478 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YBL028C	P38202	106 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YBR259W	P38338	688 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	SSZ1	P38788	538 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	PET100	P38958	111 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	ECM1	P39715	212 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	PXA1	P41909	870 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YJR039W	P47107	1121 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	MNN10	P50108	393 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	EFM5	P53200	248 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	YGR016W	P53209	190 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
SKT5	YBL061C	SLU7	Q02775	382 aa	Known RBP	2.97	□□□□□ -1.93
SKT5	YBL061C	RAD33	Q04231	177 aa		2.97	□□□□□ -1.93
SKT5	YBL061C	YMR111C	Q04461	462 aa	Predicted RBP	2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms