RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
PHGDH-233ENST00000642021 LINC00301Q8NCQ3 95 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 RTEL1Q9NZ71 1219 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
PHGDH-233ENST00000642021 ZNF592Q92610 1267 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
PHGDH-233ENST00000642021 COL18A1P39060 1754 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CCDC69A6NI79 296 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CCZ1BP86790 482 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CCZ1P86791 482 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-233ENST00000642021 WASHC4Q2M389 1173 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 PUS7LQ9H0K6 701 aaKnown RBP16.14■□□□□ 0.17
PHGDH-233ENST00000642021 NEDD4P46934 1319 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-233ENST00000642021 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CEP126Q9P2H0 1117 aa16.14■□□□□ 0.17
PHGDH-233ENST00000642021 CIAO1O76071 339 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 XAGE2Q96GT9 111 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 TRMT1Q9NXH9 659 aaKnown RBP16.13■□□□□ 0.17
PHGDH-233ENST00000642021 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-233ENST00000642021 ANTXR2P58335 489 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 DPCR1Q3MIW9 517 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 CEP57L1Q8IYX8 460 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 CCDC112Q8NEF3 446 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 PAXBP1Q9Y5B6 917 aa16.13■□□□□ 0.17
PHGDH-233ENST00000642021 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 PRC1O43663 620 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 ATF3P18847 181 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 C8orf76Q96K31 380 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 ZAP70P43403 619 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 NYAP1Q6ZVC0 841 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-233ENST00000642021 ATG3Q9NT62 314 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 KIAA1468Q9P260 1216 aa16.12■□□□□ 0.17
PHGDH-233ENST00000642021 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-233ENST00000642021 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 STK38Q15208 465 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 SF3A1Q15459 793 aaKnown RBP16.11■□□□□ 0.17
PHGDH-233ENST00000642021 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
PHGDH-233ENST00000642021 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
PHGDH-233ENST00000642021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
PHGDH-233ENST00000642021 MYH15Q9Y2K3 1946 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 GOLGA8BA8MQT2 603 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 BIN1O00499 593 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 MYSM1Q5VVJ2 828 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 SPTLC2O15270 562 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 NEMFO60524 1076 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 FAM89AQ96GI7 184 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
PHGDH-233ENST00000642021 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-233ENST00000642021 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 DMTNQ08495 405 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 PTPN14Q15678 1187 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
PHGDH-233ENST00000642021 AIFM3Q96NN9 605 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 POLR3EQ9NVU0 708 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 AXDND1Q5T1B0 1012 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-233ENST00000642021 CCAR2Q8N163 923 aaKnown RBP16.09■□□□□ 0.17
PHGDH-233ENST00000642021 TJP1Q07157 1748 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 ZNF202O95125 648 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 SYCP1Q15431 976 aa16.09■□□□□ 0.17
PHGDH-233ENST00000642021 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
PHGDH-233ENST00000642021 ABCC6O95255 1503 aa16.08■□□□□ 0.17
PHGDH-233ENST00000642021 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 ISM2Q6H9L7 571 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 APPBP2Q92624 585 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 XPO4Q9C0E2 1151 aaKnown RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 V9GYY5 206 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 GPAA1O43292 621 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 YEATS4O95619 227 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 KIF23Q02241 960 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
PHGDH-233ENST00000642021 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-233ENST00000642021 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 CPLX1O14810 134 aa16.07■□□□□ 0.16
PHGDH-233ENST00000642021 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1592.7 ms