RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 PPFIA3O75145 1194 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 ADD1P35611 737 aaKnown RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 DDB1Q16531 1140 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 CKAP2LQ8IYA6 745 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 GPHNQ9NQX3 736 aaPredicted RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 NR1I2O75469 434 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 IMMTQ16891 758 aaKnown RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 CDCA7Q9BWT1 371 aaPredicted RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 CNNM1Q9NRU3 951 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 DDX19AQ9NUU7 478 aaKnown RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 TRMT112Q9UI30 125 aaKnown RBP22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 CFAP45Q9UL16 551 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 MRVI1Q9Y6F6 885 aa22.25■■□□□ 1.15
CROCCP2-206ENST00000639594 SPATA31A6Q5VVP1 1343 aa22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 PLCB2Q00722 1185 aa22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 TYRO3Q06418 890 aa22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 BICD2Q8TD16 824 aa22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 ZNF830Q96NB3 372 aaPredicted RBP22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 CLSTN2Q9H4D0 955 aa22.24■■□□□ 1.15
CROCCP2-206ENST00000639594 CEBPZQ03701 1054 aaKnown RBP22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 FBXL16Q8N461 479 aa22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 VGLL2Q8N8G2 317 aa22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 MARCH10Q8NA82 808 aaPredicted RBP22.23■■□□□ 1.15
CROCCP2-206ENST00000639594 GPAA1O43292 621 aa22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 FAM98CQ17RN3 349 aaKnown RBP22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 FNBP4Q8N3X1 1017 aaPredicted RBP22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 PDE8AO60658 829 aa22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 EVCP57679 992 aa22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 RBM43Q6ZSC3 357 aaKnown RBP22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 DZIP3Q86Y13 1208 aaKnown RBP22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 FTOQ9C0B1 505 aaKnown RBP eCLIP22.22■■□□□ 1.15
CROCCP2-206ENST00000639594 GUCY1B3Q02153 619 aa22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 MB21D2Q8IYB1 491 aaPredicted RBP22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 FAM200AQ8TCP9 573 aa22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 UBN2Q6ZU65 1347 aa22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 FDPSP14324 419 aaKnown RBP22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 VPS72Q15906 364 aa22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 R3HCC1Q9Y3T6 440 aaKnown RBP22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
CROCCP2-206ENST00000639594 PRC1O43663 620 aa22.2■■□□□ 1.14
CROCCP2-206ENST00000639594 PDE8BO95263 885 aa22.2■■□□□ 1.14
CROCCP2-206ENST00000639594 ADD2P35612 726 aa22.2■■□□□ 1.14
CROCCP2-206ENST00000639594 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.144e-9■■■■■ 29.4
CROCCP2-206ENST00000639594 RCOR1Q9UKL0 485 aa22.2■■□□□ 1.14
CROCCP2-206ENST00000639594 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 TPM2P07951 284 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 ANTXR2P58335 489 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 ZNF512BQ96KM6 892 aaPredicted RBP22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 PIH1D3Q9NQM4 214 aaKnown RBP22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 ARAP2Q8WZ64 1704 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 IL6STP40189 918 aaPredicted RBP22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 KIAA2012Q0VF49 1180 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 ANO6Q4KMQ2 910 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 USP28Q96RU2 1077 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 TTC12Q9H892 705 aaPredicted RBP22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 USP21Q9UK80 565 aa22.19■■□□□ 1.14
CROCCP2-206ENST00000639594 ZNF213O14771 459 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 SLC9C2Q5TAH2 1124 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 LUZP1Q86V48 1076 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 ZNF34Q8IZ26 560 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 NCOA7Q8NI08 942 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 ACSBG1Q96GR2 724 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 C4AP0C0L4 1744 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 C4BP0C0L5 1744 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 PHKA1P46020 1223 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 CHMP4CQ96CF2 233 aa22.18■■□□□ 1.14
CROCCP2-206ENST00000639594 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
CROCCP2-206ENST00000639594 CCDC102BQ68D86 513 aa22.17■■□□□ 1.14
CROCCP2-206ENST00000639594 CBX8Q9HC52 389 aa22.17■■□□□ 1.14
CROCCP2-206ENST00000639594 TTF1Q15361 905 aaPredicted RBP22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 HELBQ8NG08 1087 aaPredicted RBP22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 ZNF396Q96N95 335 aaPredicted RBP22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 NBPF3Q9H094 633 aa22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 HPS5Q9UPZ3 1129 aa22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 RALYLQ86SE5 291 aaKnown RBP22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 CCAR1Q8IX12 1150 aaKnown RBP22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 LRP5O75197 1615 aa22.16■■□□□ 1.14
CROCCP2-206ENST00000639594 ATRNO75882 1429 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 CHD4Q14839 1912 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 IDH1O75874 414 aaKnown RBP22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 ARID4AP29374 1257 aaPredicted RBP22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 TERF1P54274 439 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 SASS6Q6UVJ0 657 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 RAB11FIP4Q86YS3 637 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 GOLPH3LQ9H4A5 285 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 A0A0G2JS52 829 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 ATL3Q6DD88 541 aa22.15■■□□□ 1.14
CROCCP2-206ENST00000639594 UBE3CQ15386 1083 aa22.14■■□□□ 1.13
CROCCP2-206ENST00000639594 OTUD7BQ6GQQ9 843 aa22.14■■□□□ 1.13
CROCCP2-206ENST00000639594 ZNF532Q9HCE3 1301 aa22.14■■□□□ 1.13
CROCCP2-206ENST00000639594 DOCK2Q92608 1830 aa22.14■■□□□ 1.13
CROCCP2-206ENST00000639594 FGFR2P21802 821 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms