RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, human

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-222	ENST00000639447		F8W031	263 aa	Predicted RBP	18.56	■□□□□ 0.56
GRN-222	ENST00000639447	UBE2Q2L	H0YL09	131 aa		18.56	■□□□□ 0.56
GRN-222	ENST00000639447	TRPA1	O75762	1119 aa		18.56	■□□□□ 0.56
GRN-222	ENST00000639447	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.56	■□□□□ 0.56
GRN-222	ENST00000639447	FKBP1A	P62942	108 aa	Known RBP	18.56	■□□□□ 0.56
GRN-222	ENST00000639447	DGKZ	Q13574	1117 aa		18.56	■□□□□ 0.56
GRN-222	ENST00000639447	JAG2	Q9Y219	1238 aa		18.56	■□□□□ 0.56
GRN-222	ENST00000639447	UTY	O14607	1347 aa		18.56	■□□□□ 0.56
GRN-222	ENST00000639447	MYO1B	O43795	1136 aa		18.55	■□□□□ 0.56
GRN-222	ENST00000639447	ARMC9	Q7Z3E5	817 aa		18.55	■□□□□ 0.56
GRN-222	ENST00000639447	UBE4A	Q14139	1066 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	CFAP100	Q494V2	611 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	MTMR14	Q8NCE2	650 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	KAZALD1	Q96I82	304 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	CSRNP1	Q96S65	589 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	BICC1	Q9H694	974 aa	Known RBP	18.54	■□□□□ 0.56
GRN-222	ENST00000639447	MROH5	Q6ZUA9	1318 aa		18.54	■□□□□ 0.56
GRN-222	ENST00000639447	RABL6	Q3YEC7	729 aa	Predicted RBP	18.53	■□□□□ 0.56
GRN-222	ENST00000639447	SSH1	Q8WYL5	1049 aa		18.53	■□□□□ 0.56
GRN-222	ENST00000639447	PPP2R3B	Q9Y5P8	575 aa		18.53	■□□□□ 0.56
GRN-222	ENST00000639447	ARAP2	Q8WZ64	1704 aa		18.53	■□□□□ 0.56
GRN-222	ENST00000639447	SPDYE2B	A6NHP3	402 aa		18.52	■□□□□ 0.56
GRN-222	ENST00000639447	SPDYE6	P0CI01	402 aa		18.52	■□□□□ 0.56
GRN-222	ENST00000639447	PRKG1	Q13976	671 aa		18.52	■□□□□ 0.56
GRN-222	ENST00000639447	PUS3	Q9BZE2	481 aa	Known RBP	18.52	■□□□□ 0.56
GRN-222	ENST00000639447	VEZT	Q9HBM0	779 aa		18.52	■□□□□ 0.56
GRN-222	ENST00000639447	FAM205A	Q6ZU69	1335 aa		18.52	■□□□□ 0.56
GRN-222	ENST00000639447	CLRN2	A0PK11	232 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	HIBADH	P31937	336 aa	Known RBP	18.51	■□□□□ 0.55
GRN-222	ENST00000639447	GYG1	P46976	350 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	RBM5	P52756	815 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
GRN-222	ENST00000639447	SLFN5	Q08AF3	891 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	METTL24	Q5JXM2	366 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	MFSD14B	Q5SR56	506 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	ANKRD44	Q8N8A2	993 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	DEFB129	Q9H1M3	183 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	ANGEL1	Q9UNK9	670 aa	Known RBP	18.51	■□□□□ 0.55
GRN-222	ENST00000639447	PCDHAC2	Q9Y5I4	1007 aa		18.51	■□□□□ 0.55
GRN-222	ENST00000639447	SREBF2	Q12772	1141 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	MKRN3	Q13064	507 aa	Known RBP	18.5	■□□□□ 0.55
GRN-222	ENST00000639447	VPS37D	Q86XT2	251 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	TDRD7	Q8NHU6	1098 aa	Known RBP	18.5	■□□□□ 0.55
GRN-222	ENST00000639447	SMC4	Q9NTJ3	1288 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	ECM29	Q5VYK3	1845 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	SSC5D	A1L4H1	1573 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	AKAP11	Q9UKA4	1901 aa		18.5	■□□□□ 0.55
GRN-222	ENST00000639447	PTPN12	Q05209	780 aa	Known RBP	18.49	■□□□□ 0.55
GRN-222	ENST00000639447	ALDH1L2	Q3SY69	923 aa		18.49	■□□□□ 0.55
GRN-222	ENST00000639447	RIPOR2	Q9Y4F9	1068 aa		18.49	■□□□□ 0.55
GRN-222	ENST00000639447	CASP8AP2	Q9UKL3	1982 aa		18.49	■□□□□ 0.55
GRN-222	ENST00000639447	FAM84B	Q96KN1	310 aa	Predicted RBP	18.49	■□□□□ 0.55
GRN-222	ENST00000639447	TTF2	Q9UNY4	1162 aa	Known RBP	18.49	■□□□□ 0.55
GRN-222	ENST00000639447	LRRC24	Q50LG9	513 aa		18.48	■□□□□ 0.55
GRN-222	ENST00000639447	PRMT6	Q96LA8	375 aa	Predicted RBP	18.48	■□□□□ 0.55
GRN-222	ENST00000639447	PPP1R12B	O60237	982 aa	Predicted RBP	18.47	■□□□□ 0.55
GRN-222	ENST00000639447	FRAT2	O75474	233 aa	Predicted RBP	18.47	■□□□□ 0.55
GRN-222	ENST00000639447	CHAF1A	Q13111	956 aa	Predicted RBP	18.47	■□□□□ 0.55
GRN-222	ENST00000639447	TNFAIP1	Q13829	316 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	SUPT20HL1	Q3ZLR7	823 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	CAVIN4	Q5BKX8	364 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	LDLRAD1	Q5T700	205 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	CTU1	Q7Z7A3	348 aa	Known RBP	18.47	■□□□□ 0.55
GRN-222	ENST00000639447	CDCA7L	Q96GN5	454 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	SERPINA10	Q9UK55	444 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	FZD1	Q9UP38	647 aa		18.47	■□□□□ 0.55
GRN-222	ENST00000639447	AOX1	Q06278	1338 aa		18.46	■□□□□ 0.55
GRN-222	ENST00000639447	MAP3K11	Q16584	847 aa		18.46	■□□□□ 0.55
GRN-222	ENST00000639447	SPRYD7	Q5W111	196 aa		18.46	■□□□□ 0.55
GRN-222	ENST00000639447	USP44	Q9H0E7	712 aa		18.46	■□□□□ 0.55
GRN-222	ENST00000639447	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.46	■□□□□ 0.55
GRN-222	ENST00000639447	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.46	■□□□□ 0.55
GRN-222	ENST00000639447	PDE8B	O95263	885 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	CT47B1	P0C2W7	299 aa	Predicted RBP	18.45	■□□□□ 0.54
GRN-222	ENST00000639447	IREB2	P48200	963 aa	Known RBP	18.45	■□□□□ 0.54
GRN-222	ENST00000639447	TM4SF4	P48230	202 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	RASA3	Q14644	834 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	PUM3	Q15397	648 aa	Known RBP	18.45	■□□□□ 0.54
GRN-222	ENST00000639447	SPDYE2	Q495Y8	402 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	FBXO33	Q7Z6M2	555 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	VGLL2	Q8N8G2	317 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	KLHDC4	Q8TBB5	520 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	TBC1D22A	Q8WUA7	517 aa		18.45	■□□□□ 0.54
GRN-222	ENST00000639447	TBC1D8	O95759	1140 aa		18.44	■□□□□ 0.54
GRN-222	ENST00000639447	IFIT1	P09914	478 aa	Known RBP	18.44	■□□□□ 0.54
GRN-222	ENST00000639447	CRK	P46108	304 aa		18.44	■□□□□ 0.54
GRN-222	ENST00000639447	MLLT1	Q03111	559 aa	Predicted RBP	18.44	■□□□□ 0.54
GRN-222	ENST00000639447	SLC10A4	Q96EP9	437 aa		18.44	■□□□□ 0.54
GRN-222	ENST00000639447	ZNF70	Q9UC06	446 aa	Predicted RBP	18.44	■□□□□ 0.54
GRN-222	ENST00000639447	MANSC4	A6NHS7	340 aa	Predicted RBP	18.43	■□□□□ 0.54
GRN-222	ENST00000639447	ZBTB48	P10074	688 aa	Predicted RBP	18.43	■□□□□ 0.54
GRN-222	ENST00000639447	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.43	■□□□□ 0.54
GRN-222	ENST00000639447	WNK4	Q96J92	1243 aa		18.43	■□□□□ 0.54
GRN-222	ENST00000639447	TDRD3	Q9H7E2	651 aa	Known RBP	18.43	■□□□□ 0.54
GRN-222	ENST00000639447	KIF16B	Q96L93	1317 aa		18.43	■□□□□ 0.54
GRN-222	ENST00000639447	UNCX	A6NJT0	531 aa		18.42	■□□□□ 0.54
GRN-222	ENST00000639447	CCER2	I3L3R5	266 aa		18.42	■□□□□ 0.54
GRN-222	ENST00000639447	UBTFL1	P0CB47	393 aa	Predicted RBP	18.42	■□□□□ 0.54
GRN-222	ENST00000639447	TNNI2	P48788	182 aa		18.42	■□□□□ 0.54
GRN-222	ENST00000639447	DZIP1L	Q8IYY4	767 aa	Known RBP	18.42	■□□□□ 0.54
GRN-222	ENST00000639447	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.42	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms