RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 GNAQP50148 359 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 CHMP4BP1P59074 171 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 CCDC178Q5BJE1 867 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 HSPA4P34932 840 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
SCARB2-208ENST00000638372 RIMBP2O15034 1052 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 PDE8AO60658 829 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 RBSNQ9H1K0 784 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 BMP15O95972 392 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 STX17P56962 302 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCARB2-208ENST00000638372 KIF20AO95235 890 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 PHKG2P15735 406 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 ZAP70P43403 619 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
SCARB2-208ENST00000638372 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
SCARB2-208ENST00000638372 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
SCARB2-208ENST00000638372 CEP135Q66GS9 1140 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 SAMM50Q9Y512 469 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 ERICH4A6NGS2 130 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 JAK2O60674 1132 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 LIG1P18858 919 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 TRIM21P19474 475 aaKnown RBP16.41■□□□□ 0.22
SCARB2-208ENST00000638372 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-208ENST00000638372 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
SCARB2-208ENST00000638372 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
SCARB2-208ENST00000638372 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 MYL10Q9BUA6 226 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
SCARB2-208ENST00000638372 BRAPQ7Z569 592 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 NEFHP12036 1026 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
SCARB2-208ENST00000638372 PTGS1P23219 599 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 PTH1RQ03431 593 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
SCARB2-208ENST00000638372 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-208ENST00000638372 MCM7P33993 719 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 TAX1BP1Q86VP1 789 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 ANGEL1Q9UNK9 670 aaKnown RBP16.39■□□□□ 0.21
SCARB2-208ENST00000638372 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 PARP10Q53GL7 1025 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 PLIN2Q99541 437 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 ASIC1P78348 528 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 PKP1Q13835 747 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
SCARB2-208ENST00000638372 AKR1B10O60218 316 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 ATP5JP18859 108 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 USP8P40818 1118 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
SCARB2-208ENST00000638372 MYO1BO43795 1136 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CALM1P0DP23 149 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CALM2P0DP24 149 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CALM3P0DP25 149 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 PAFAH1B1P43034 410 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 TNNI2P48788 182 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 IFNKQ9P0W0 207 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-208ENST00000638372 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CALML3P27482 149 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 UNC5CLQ8IV45 518 aa16.38■□□□□ 0.21
SCARB2-208ENST00000638372 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-208ENST00000638372 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 TRAPPC3LQ5T215 181 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 PHKBQ93100 1093 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
SCARB2-208ENST00000638372 KRT2P35908 639 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 OGFOD1Q8N543 542 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 LPIN2Q92539 896 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 MLH3Q9UHC1 1453 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 RTL9Q8NET4 1388 aa16.37■□□□□ 0.21
SCARB2-208ENST00000638372 POLR3GO15318 223 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-208ENST00000638372 ME3Q16798 604 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 CNBD1Q8NA66 436 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 LMBRD1Q9NUN5 540 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 PSMA7O14818 248 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 FAM160A1Q05DH4 1040 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 TTLL12Q14166 644 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-208ENST00000638372 ARHGEF25Q86VW2 580 aa16.36■□□□□ 0.21
SCARB2-208ENST00000638372 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms