RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 DDX11Q96FC9 970 aa21.81■■□□□ 1.08
CTSD-212ENST00000637815 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
CTSD-212ENST00000637815 KIF3AQ9Y496 699 aa21.81■■□□□ 1.08
CTSD-212ENST00000637815 PTPDC1A2A3K4 754 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 H3BQV1 296 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 PHKA1P46020 1223 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 ITPK1Q13572 414 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 UBE3CQ15386 1083 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 IFFO2Q5TF58 517 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 LEO1Q8WVC0 666 aaPredicted RBP21.8■■□□□ 1.08
CTSD-212ENST00000637815 SPATA32Q96LK8 384 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 RTL9Q8NET4 1388 aa21.8■■□□□ 1.08
CTSD-212ENST00000637815 MB21D2Q8IYB1 491 aaPredicted RBP21.8■■□□□ 1.08
CTSD-212ENST00000637815 PIH1D3Q9NQM4 214 aaKnown RBP21.8■■□□□ 1.08
CTSD-212ENST00000637815 CHD4Q14839 1912 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 TPRNQ4KMQ1 711 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 WDR19Q8NEZ3 1342 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 HCLS1P14317 486 aaPredicted RBP21.79■■□□□ 1.08
CTSD-212ENST00000637815 HAND2P61296 217 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 SLC9C2Q5TAH2 1124 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 CHST3Q7LGC8 479 aa21.79■■□□□ 1.08
CTSD-212ENST00000637815 CCT2P78371 535 aaKnown RBP21.78■■□□□ 1.08
CTSD-212ENST00000637815 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
CTSD-212ENST00000637815 MCM5P33992 734 aa21.77■■□□□ 1.08
CTSD-212ENST00000637815 GIMAP6Q6P9H5 292 aa21.77■■□□□ 1.08
CTSD-212ENST00000637815 NCOA5Q9HCD5 579 aaKnown RBP21.77■■□□□ 1.08
CTSD-212ENST00000637815 A0A1B0GUL6 1792 aa21.77■■□□□ 1.08
CTSD-212ENST00000637815 ZNF213O14771 459 aa21.77■■□□□ 1.07
CTSD-212ENST00000637815 NTSR2O95665 410 aa21.77■■□□□ 1.07
CTSD-212ENST00000637815 SLC5A1P13866 664 aa21.77■■□□□ 1.07
CTSD-212ENST00000637815 NCOA7Q8NI08 942 aa21.77■■□□□ 1.07
CTSD-212ENST00000637815 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.07
CTSD-212ENST00000637815 C4AP0C0L4 1744 aa21.76■■□□□ 1.07
CTSD-212ENST00000637815 C4BP0C0L5 1744 aa21.76■■□□□ 1.07
CTSD-212ENST00000637815 A0A0G2JS52 829 aa21.76■■□□□ 1.07
CTSD-212ENST00000637815 TCRBV5S4A2TA0A5A2 114 aa21.76■■□□□ 1.07
CTSD-212ENST00000637815 LIG1P18858 919 aa21.76■■□□□ 1.07
CTSD-212ENST00000637815 NOL7Q9UMY1 257 aaKnown RBP21.76■■□□□ 1.07
CTSD-212ENST00000637815 PRC1O43663 620 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 IDH1O75874 414 aaKnown RBP21.75■■□□□ 1.07
CTSD-212ENST00000637815 PDE6AP16499 860 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 CCDC152Q4G0S7 254 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
CTSD-212ENST00000637815 ZNF532Q9HCE3 1301 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 ANTXR2P58335 489 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 MPHOSPH8Q99549 860 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 CFAP45Q9UL16 551 aa21.75■■□□□ 1.07
CTSD-212ENST00000637815 CARMIL3Q8ND23 1372 aa21.74■■□□□ 1.07
CTSD-212ENST00000637815 NBPF3Q9H094 633 aa21.74■■□□□ 1.07
CTSD-212ENST00000637815 SEC31BQ9NQW1 1179 aa21.74■■□□□ 1.07
CTSD-212ENST00000637815 GPHNQ9NQX3 736 aaPredicted RBP21.74■■□□□ 1.07
CTSD-212ENST00000637815 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.074e-13■□□□□ 10.1
CTSD-212ENST00000637815 GOLGA6L4A6NEF3 574 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 ADD1P35611 737 aaKnown RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 RALYLQ86SE5 291 aaKnown RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 SPATA5Q8NB90 893 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 PGBD1Q96JS3 809 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 NUP62CLQ9H1M0 184 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 CCDC39Q9UFE4 941 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 WWC3Q9ULE0 1092 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 NAP1L2Q9ULW6 460 aaPredicted RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 ATL3Q6DD88 541 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 DDX19AQ9NUU7 478 aaKnown RBP21.73■■□□□ 1.07
CTSD-212ENST00000637815 ZMYM6O95789 1325 aa21.73■■□□□ 1.07
CTSD-212ENST00000637815 FAM177BA6PVY3 158 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 MSNP26038 577 aaKnown RBP21.72■■□□□ 1.07
CTSD-212ENST00000637815 RASGRF1Q13972 1273 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 CCDC192P0DO97 292 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 FDPSP14324 419 aaKnown RBP21.72■■□□□ 1.07
CTSD-212ENST00000637815 MAP3K11Q16584 847 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 RBM43Q6ZSC3 357 aaKnown RBP21.72■■□□□ 1.07
CTSD-212ENST00000637815 DACT1Q9NYF0 836 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.72■■□□□ 1.07
CTSD-212ENST00000637815 ZNF652Q9Y2D9 606 aa21.72■■□□□ 1.07
CTSD-212ENST00000637815 SCN7AQ01118 1682 aa21.71■■□□□ 1.07
CTSD-212ENST00000637815 BCL9LQ86UU0 1499 aa21.71■■□□□ 1.07
CTSD-212ENST00000637815 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
CTSD-212ENST00000637815 ALX1Q15699 326 aa21.71■■□□□ 1.07
CTSD-212ENST00000637815 STRBPQ96SI9 672 aaKnown RBP21.71■■□□□ 1.07
CTSD-212ENST00000637815 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
CTSD-212ENST00000637815 KLF18A0A0U1RQI7 1052 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 KCNQ2O43526 872 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
CTSD-212ENST00000637815 CLEC4GQ6UXB4 293 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 TBC1D10CQ8IV04 446 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 COL4A1P02462 1669 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 RCOR1Q9UKL0 485 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
CTSD-212ENST00000637815 GOLGA8BA8MQT2 603 aa21.69■■□□□ 1.06
CTSD-212ENST00000637815 MAP3K12Q12852 859 aa21.69■■□□□ 1.06
CTSD-212ENST00000637815 TRDNQ13061 729 aa21.69■■□□□ 1.06
CTSD-212ENST00000637815 AIDAQ96BJ3 306 aa21.69■■□□□ 1.06
CTSD-212ENST00000637815 CLSTN2Q9H4D0 955 aa21.69■■□□□ 1.06
CTSD-212ENST00000637815 SNAP23O00161 211 aa21.68■■□□□ 1.06
CTSD-212ENST00000637815 TNMDQ9H2S6 317 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms