RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 PODXL2Q9NZ53 605 aa13.08□□□□□ -0.32
CHD2-229ENST00000637789 OTOFQ9HC10 1997 aa13.08□□□□□ -0.32
CHD2-229ENST00000637789 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
CHD2-229ENST00000637789 GTF2A2P52657 109 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 NBPF12Q5TAG4 269 aaPredicted RBP13.07□□□□□ -0.32
CHD2-229ENST00000637789 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
CHD2-229ENST00000637789 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
CHD2-229ENST00000637789 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
CHD2-229ENST00000637789 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
CHD2-229ENST00000637789 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
CHD2-229ENST00000637789 PRKCZQ05513 592 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 C17orf99Q6UX52 265 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
CHD2-229ENST00000637789 ADAMTS19Q8TE59 1207 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 PAK6Q9NQU5 681 aaPredicted RBP13.06□□□□□ -0.32
CHD2-229ENST00000637789 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
CHD2-229ENST00000637789 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
CHD2-229ENST00000637789 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
CHD2-229ENST00000637789 CPA4Q9UI42 421 aa13.05□□□□□ -0.32
CHD2-229ENST00000637789 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
CHD2-229ENST00000637789 ADGRA2Q96PE1 1338 aa13.05□□□□□ -0.32
CHD2-229ENST00000637789 BDP1A6H8Y1 2624 aa13.05□□□□□ -0.32
CHD2-229ENST00000637789 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
CHD2-229ENST00000637789 INHAP05111 366 aa13.04□□□□□ -0.32
CHD2-229ENST00000637789 MCM10Q7L590 875 aa13.04□□□□□ -0.32
CHD2-229ENST00000637789 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
CHD2-229ENST00000637789 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
CHD2-229ENST00000637789 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
CHD2-229ENST00000637789 ADCY3O60266 1144 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 ELNP15502 786 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
CHD2-229ENST00000637789 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
CHD2-229ENST00000637789 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
CHD2-229ENST00000637789 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 PANK3Q9H999 370 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 ZCCHC17Q9NP64 241 aaKnown RBP13.03□□□□□ -0.32
CHD2-229ENST00000637789 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 GABRQQ9UN88 632 aa13.03□□□□□ -0.32
CHD2-229ENST00000637789 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
CHD2-229ENST00000637789 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.33
CHD2-229ENST00000637789 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.33
CHD2-229ENST00000637789 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
CHD2-229ENST00000637789 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.33
CHD2-229ENST00000637789 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
CHD2-229ENST00000637789 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
CHD2-229ENST00000637789 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
CHD2-229ENST00000637789 MMP14P50281 582 aa13.01□□□□□ -0.33
CHD2-229ENST00000637789 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
CHD2-229ENST00000637789 C11orf49Q9H6J7 331 aa13.01□□□□□ -0.33
CHD2-229ENST00000637789 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
CHD2-229ENST00000637789 CETPP11597 493 aa13□□□□□ -0.33
CHD2-229ENST00000637789 VGLL4Q14135 290 aa13□□□□□ -0.33
CHD2-229ENST00000637789 DCTN1Q14203 1278 aa13□□□□□ -0.33
CHD2-229ENST00000637789 STRIP1Q5VSL9 837 aa13□□□□□ -0.33
CHD2-229ENST00000637789 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
CHD2-229ENST00000637789 ASB2Q96Q27 587 aa13□□□□□ -0.33
CHD2-229ENST00000637789 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
CHD2-229ENST00000637789 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
CHD2-229ENST00000637789 MRE11P49959 708 aa12.99□□□□□ -0.33
CHD2-229ENST00000637789 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
CHD2-229ENST00000637789 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
CHD2-229ENST00000637789 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
CHD2-229ENST00000637789 FLT3LGP49771 235 aa12.98□□□□□ -0.33
CHD2-229ENST00000637789 FCGRTP55899 365 aa12.98□□□□□ -0.33
CHD2-229ENST00000637789 DLGAP5Q15398 846 aa12.98□□□□□ -0.33
CHD2-229ENST00000637789 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
CHD2-229ENST00000637789 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
CHD2-229ENST00000637789 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.335e-7■■■■□ 24.3
CHD2-229ENST00000637789 PCDHAC2Q9Y5I4 1007 aa12.98□□□□□ -0.33
CHD2-229ENST00000637789 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 PFASO15067 1338 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 XDHP47989 1333 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 RASA3Q14644 834 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 VEZTQ9HBM0 779 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 SEC31BQ9NQW1 1179 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 MGAMO43451 1857 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 NCOR1O75376 2440 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
CHD2-229ENST00000637789 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
CHD2-229ENST00000637789 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
CHD2-229ENST00000637789 NECAB3Q96P71 396 aaPredicted RBP12.96□□□□□ -0.33
CHD2-229ENST00000637789 THEGQ9P2T0 379 aa12.96□□□□□ -0.33
CHD2-229ENST00000637789 AOX1Q06278 1338 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 IRF6O14896 467 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 ATP2B4P23634 1241 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
CHD2-229ENST00000637789 SNAPC2Q13487 334 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 PDIA6Q15084 440 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 MTMR14Q8NCE2 650 aa12.95□□□□□ -0.34
CHD2-229ENST00000637789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHD2-229ENST00000637789 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms