RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
CTSD-211ENST00000637387 SPATA5Q8NB90 893 aa18.48■□□□□ 0.55
CTSD-211ENST00000637387 ANO2Q9NQ90 1003 aa18.48■□□□□ 0.55
CTSD-211ENST00000637387 PIH1D3Q9NQM4 214 aaKnown RBP18.48■□□□□ 0.55
CTSD-211ENST00000637387 PODXL2Q9NZ53 605 aa18.48■□□□□ 0.55
CTSD-211ENST00000637387 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
CTSD-211ENST00000637387 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
CTSD-211ENST00000637387 RASSF7Q02833 373 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 C15orf52Q6ZUT6 534 aaKnown RBP18.47■□□□□ 0.55
CTSD-211ENST00000637387 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 ZNF622Q969S3 477 aaKnown RBP eCLIP18.47■□□□□ 0.55
CTSD-211ENST00000637387 SEC62Q99442 399 aaKnown RBP18.47■□□□□ 0.55
CTSD-211ENST00000637387 LEMD3Q9Y2U8 911 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 NFKBIEO00221 500 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 ZBTB22O15209 634 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 KCNJ4P48050 445 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 ZMYM1Q5SVZ6 1142 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 STYK1Q6J9G0 422 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 SP8Q8IXZ3 490 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
CTSD-211ENST00000637387 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
CTSD-211ENST00000637387 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
CTSD-211ENST00000637387 GPR101Q96P66 508 aaPredicted RBP18.46■□□□□ 0.55
CTSD-211ENST00000637387 ANKIB1Q9P2G1 1089 aa18.46■□□□□ 0.55
CTSD-211ENST00000637387 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
CTSD-211ENST00000637387 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 LMNB1P20700 586 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 PTH1RQ03431 593 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 MAST3O60307 1309 aa18.45■□□□□ 0.54
CTSD-211ENST00000637387 PDS5AQ29RF7 1337 aaKnown RBP18.45■□□□□ 0.54
CTSD-211ENST00000637387 RNF113AO15541 343 aaKnown RBP18.44■□□□□ 0.54
CTSD-211ENST00000637387 TTF1Q15361 905 aaPredicted RBP18.44■□□□□ 0.54
CTSD-211ENST00000637387 CAVIN4Q5BKX8 364 aa18.44■□□□□ 0.54
CTSD-211ENST00000637387 NMRK2Q9NPI5 230 aa18.44■□□□□ 0.54
CTSD-211ENST00000637387 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
CTSD-211ENST00000637387 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
CTSD-211ENST00000637387 NSFL1CQ9UNZ2 370 aaKnown RBP18.44■□□□□ 0.54
CTSD-211ENST00000637387 ZC3H4Q9UPT8 1303 aaKnown RBP18.44■□□□□ 0.54
CTSD-211ENST00000637387 UFL1O94874 794 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 ATP2B4P23634 1241 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 CCDC129Q6ZRS4 1044 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 TBC1D16Q8TBP0 767 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 PSME4Q14997 1843 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 FER1L6Q2WGJ9 1857 aa18.43■□□□□ 0.54
CTSD-211ENST00000637387 M0R2C6 588 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 C21orf2O43822 256 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 HIBADHP31937 336 aaKnown RBP18.42■□□□□ 0.54
CTSD-211ENST00000637387 HSPA4P34932 840 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 ADD2P35612 726 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
CTSD-211ENST00000637387 OSBP2Q969R2 916 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 TCRBV5S4A2TA0A5A2 114 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 SEMA3EO15041 775 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
CTSD-211ENST00000637387 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
CTSD-211ENST00000637387 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
CTSD-211ENST00000637387 TOMM70O94826 608 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 ZFYP08048 801 aaPredicted RBP18.41■□□□□ 0.54
CTSD-211ENST00000637387 APPBP2Q92624 585 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 MAP4K1Q92918 833 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 DENND2AQ9ULE3 1009 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
CTSD-211ENST00000637387 FOXP2O15409 715 aa18.4■□□□□ 0.54
CTSD-211ENST00000637387 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
CTSD-211ENST00000637387 PDE6AP16499 860 aa18.4■□□□□ 0.54
CTSD-211ENST00000637387 VPS37DQ86XT2 251 aa18.4■□□□□ 0.54
CTSD-211ENST00000637387 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
CTSD-211ENST00000637387 PUS7LQ9H0K6 701 aaKnown RBP18.4■□□□□ 0.54
CTSD-211ENST00000637387 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
CTSD-211ENST00000637387 HSPA6P17066 643 aa18.39■□□□□ 0.53
CTSD-211ENST00000637387 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
CTSD-211ENST00000637387 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■□□ 17.7
CTSD-211ENST00000637387 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
CTSD-211ENST00000637387 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 LRRFIP1Q32MZ4 808 aaKnown RBP18.38■□□□□ 0.53
CTSD-211ENST00000637387 SLC9C2Q5TAH2 1124 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 KCNB2Q92953 911 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 DDRGK1Q96HY6 314 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
CTSD-211ENST00000637387 ZNF532Q9HCE3 1301 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 DICER1Q9UPY3 1922 aaKnown RBP18.38■□□□□ 0.53
CTSD-211ENST00000637387 ANAPC15P60006 121 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 ZNF804AQ7Z570 1209 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 MPNDQ8N594 471 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 ZNF384Q8TF68 577 aa18.38■□□□□ 0.53
CTSD-211ENST00000637387 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
CTSD-211ENST00000637387 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
CTSD-211ENST00000637387 CD2BP2O95400 341 aaKnown RBP18.37■□□□□ 0.53
CTSD-211ENST00000637387 IL1R1P14778 569 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms