RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 CCSAPQ6IQ19 270 aaPredicted RBP3.32□□□□□ -1.88
ATRX-220ENST00000635865 XKR5Q6UX68 686 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 KRT26Q7Z3Y9 468 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 ALYREFQ86V81 257 aaKnown RBP3.32□□□□□ -1.88
ATRX-220ENST00000635865 SYNPOQ8N3V7 929 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 SNX29Q8TEQ0 813 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 L3MBTL2Q969R5 705 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 EAF1Q96JC9 268 aaPredicted RBP3.32□□□□□ -1.88
ATRX-220ENST00000635865 SRRTQ9BXP5 876 aaKnown RBP3.32□□□□□ -1.88
ATRX-220ENST00000635865 KANSL2Q9H9L4 492 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 TMEM260Q9NX78 707 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 CABP1Q9NZU7 370 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 CNTN3Q9P232 1028 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 MSRB2Q9Y3D2 182 aa3.32□□□□□ -1.88
ATRX-220ENST00000635865 SMAD7O15105 426 aaKnown RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 SH3BP5O60239 455 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 CAND2O75155 1236 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 PHACTR2O75167 634 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 MICAL2O94851 1124 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 CNGA1P29973 690 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 SNRPNP63162 240 aaKnown RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 CBLBQ13191 982 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 RASGRF1Q13972 1273 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 UBE4AQ14139 1066 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 TLR1Q15399 786 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 CCDC85BQ15834 202 aaPredicted RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 HIF1AQ16665 826 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 C1orf53Q5VUE5 145 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 SPTY2D1Q68D10 685 aaPredicted RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 PDE12Q6L8Q7 609 aaKnown RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 WDR75Q8IWA0 830 aaKnown RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 PGBD3Q8N328 593 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 NKD1Q969G9 470 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 CRBNQ96SW2 442 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 PHACTR1Q9C0D0 580 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 ST7Q9NRC1 585 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 TMPRSS4Q9NRS4 437 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 LRRC4BQ9NT99 713 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 TERF2IPQ9NYB0 399 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 FOXD3Q9UJU5 478 aaPredicted RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 ATP8A1Q9Y2Q0 1164 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 SUPT16HQ9Y5B9 1047 aaKnown RBP3.31□□□□□ -1.88
ATRX-220ENST00000635865 COMMD10Q9Y6G5 202 aa3.31□□□□□ -1.88
ATRX-220ENST00000635865 ALG1L2C9J202 215 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SPINT1O43278 529 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 GREM1O60565 184 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 KRT18P05783 430 aaKnown RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 EPHB1P54762 984 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 EIF6P56537 245 aaKnown RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 APOBRQ0VD83 1088 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SQSTM1Q13501 440 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SAFB2Q14151 953 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATRX-220ENST00000635865 ARID5BQ14865 1188 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 DDR2Q16832 855 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 MTERF2Q49AM1 385 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 MAP9Q49MG5 647 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 C2orf27AQ580R0 203 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 PCNX4Q63HM2 1172 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 FBXL19Q6PCT2 694 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 ZNF438Q7Z4V0 828 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 ZNF784Q8NCA9 323 aaPredicted RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 NEDD1Q8NHV4 660 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 THAP3Q8WTV1 239 aaPredicted RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 CNKSR1Q969H4 720 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 PMEPA1Q969W9 287 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 ACDQ96AP0 544 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SHDQ96IW2 340 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 APBA2Q99767 749 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 ESYT1Q9BSJ8 1104 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 RBSNQ9H1K0 784 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SEMA6BQ9H3T3 888 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 SUV39H2Q9H5I1 410 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 NPHS2Q9NP85 383 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 RAB6BQ9NRW1 208 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 MBIPQ9NS73 344 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 BSDC1Q9NW68 430 aaPredicted RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 TRAK1Q9UPV9 953 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 PLAAQ9Y263 795 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 LEMD3Q9Y2U8 911 aa3.3□□□□□ -1.88
ATRX-220ENST00000635865 THRAP3Q9Y2W1 955 aaKnown RBP3.3□□□□□ -1.88
ATRX-220ENST00000635865 IGF1RP08069 1367 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 ROBO2Q9HCK4 1378 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 UBAP1LF5GYI3 381 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 F6X3S4 739 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 LILRA1O75019 489 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 IL2RAP01589 272 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 PAX3P23760 479 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 GTF2E1P29083 439 aaPredicted RBP3.29□□□□□ -1.88
ATRX-220ENST00000635865 PMLP29590 882 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 EVA1CP58658 441 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 IRX6P78412 446 aaPredicted RBP3.29□□□□□ -1.88
ATRX-220ENST00000635865 HLTFQ14527 1009 aaKnown RBP eCLIP3.29□□□□□ -1.88
ATRX-220ENST00000635865 PPP2R5AQ15172 486 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 FXNQ16595 210 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 TKFCQ3LXA3 575 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 C4orf46Q504U0 113 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 BRDTQ58F21 947 aaPredicted RBP3.29□□□□□ -1.88
ATRX-220ENST00000635865 CT47A1Q5JQC4 288 aaPredicted RBP3.29□□□□□ -1.88
ATRX-220ENST00000635865 SNAP47Q5SQN1 464 aa3.29□□□□□ -1.88
ATRX-220ENST00000635865 ZFYVE27Q5T4F4 411 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms