RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
CSMD1-218ENST00000635120 FOXO3O43524 673 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 MCM7P33993 719 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 ST5P78524 1137 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 IL16Q14005 1332 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
CSMD1-218ENST00000635120 CLGNO14967 610 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 TXNDC16Q9P2K2 825 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 STX17P56962 302 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 NAA25Q14CX7 972 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 MTRF1LQ9UGC7 380 aaKnown RBP10.28□□□□□ -0.76
CSMD1-218ENST00000635120 NDC80O14777 642 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 TNNI2P48788 182 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 CCDC14Q49A88 953 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 AKNAD1Q5T1N1 836 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 FAM160A1Q05DH4 1040 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 SETDB1Q15047 1291 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 CFAP43Q8NDM7 1665 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 F8W031 263 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-218ENST00000635120 TUBB4BP68371 445 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 PPP1R9BQ96SB3 815 aa10.28□□□□□ -0.76
CSMD1-218ENST00000635120 GTPBP4Q9BZE4 634 aaKnown RBP10.28□□□□□ -0.76
CSMD1-218ENST00000635120 LACTBP83111 547 aaPredicted RBP10.27□□□□□ -0.76
CSMD1-218ENST00000635120 CHST3Q7LGC8 479 aa10.27□□□□□ -0.76
CSMD1-218ENST00000635120 TMTC2Q8N394 836 aa10.27□□□□□ -0.76
CSMD1-218ENST00000635120 RSRC1Q96IZ7 334 aaKnown RBP10.27□□□□□ -0.76
CSMD1-218ENST00000635120 MAK16Q9BXY0 300 aaKnown RBP10.27□□□□□ -0.76
CSMD1-218ENST00000635120 CIB2O75838 187 aa10.27□□□□□ -0.76
CSMD1-218ENST00000635120 NMIQ13287 307 aaPredicted RBP10.27□□□□□ -0.76
CSMD1-218ENST00000635120 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.76
CSMD1-218ENST00000635120 CALML3P27482 149 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 ATP2B3Q16720 1220 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 DCAF17Q5H9S7 520 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 MEIS3Q99687 375 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 RAPGEF6Q8TEU7 1601 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 SNRPA1P09661 255 aaKnown RBP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 GNAQP50148 359 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 SH3BP5O60239 455 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 SMARCC2Q8TAQ2 1214 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 KAT6AQ92794 2004 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 ADGBQ8N7X0 1667 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 C10orf67Q8IYJ2 551 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 TUBB4AP04350 444 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 UAP1Q16222 522 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-218ENST00000635120 GBP6Q6ZN66 633 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 STMN2Q93045 179 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 NUMA1Q14980 2115 aa10.27□□□□□ -0.77
CSMD1-218ENST00000635120 TNNC1P63316 161 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 ZNF622Q969S3 477 aaKnown RBP eCLIP10.26□□□□□ -0.776e-7■■□□□ 11.7
CSMD1-218ENST00000635120 ALDH3A1P30838 453 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 CCDC122Q5T0U0 273 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 PLIN2Q99541 437 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 SBNO2Q9Y2G9 1366 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 NKIRAS1Q9NYS0 192 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 SYT10Q6XYQ8 523 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 CNGA4Q8IV77 575 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 LUC7L2Q9Y383 392 aaKnown RBP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 SEL1L2Q5TEA6 688 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-218ENST00000635120 WDR66Q8TBY9 1149 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 TCHPQ9BT92 498 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 PICALMQ13492 652 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 MSANTD4Q8NCY6 345 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 PCDHB15Q9Y5E8 787 aa10.26□□□□□ -0.77
CSMD1-218ENST00000635120 GRM8O00222 908 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 MAGEB6Q8N7X4 407 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 NGLY1Q96IV0 654 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 RPRD2Q5VT52 1461 aaKnown RBP10.25□□□□□ -0.77
CSMD1-218ENST00000635120 RFC4P35249 363 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 SLC9C2Q5TAH2 1124 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 GMNNO75496 209 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 CRCPO75575 148 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 VIMP08670 466 aaKnown RBP10.25□□□□□ -0.77
CSMD1-218ENST00000635120 SNX16P57768 344 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 AFAP1L1Q8TED9 768 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
CSMD1-218ENST00000635120 MKRN1Q9UHC7 482 aaKnown RBP10.25□□□□□ -0.77
CSMD1-218ENST00000635120 ELP1O95163 1332 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms