RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
TMCO1-209ENST00000628579 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-209ENST00000628579 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-209ENST00000628579 PCDHAC2Q9Y5I4 1007 aa13.14□□□□□ -0.31
TMCO1-209ENST00000628579 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
TMCO1-209ENST00000628579 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
TMCO1-209ENST00000628579 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
TMCO1-209ENST00000628579 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
TMCO1-209ENST00000628579 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
TMCO1-209ENST00000628579 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
TMCO1-209ENST00000628579 SIL1Q9H173 461 aa13.13□□□□□ -0.31
TMCO1-209ENST00000628579 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
TMCO1-209ENST00000628579 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
TMCO1-209ENST00000628579 EYA2O00167 538 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 C2orf69Q8N8R5 385 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 AOX1Q06278 1338 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
TMCO1-209ENST00000628579 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
TMCO1-209ENST00000628579 FGFR2P21802 821 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 BCAMP50895 628 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 FKBP1AP62942 108 aaKnown RBP13.11□□□□□ -0.31
TMCO1-209ENST00000628579 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
TMCO1-209ENST00000628579 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
TMCO1-209ENST00000628579 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
TMCO1-209ENST00000628579 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
TMCO1-209ENST00000628579 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 MMP14P50281 582 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
TMCO1-209ENST00000628579 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 GRIK5Q16478 980 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 CFAP100Q494V2 611 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 RGMBQ6NW40 437 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
TMCO1-209ENST00000628579 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 FAM155AB1AL88 458 aaPredicted RBP13.09□□□□□ -0.31
TMCO1-209ENST00000628579 GNAI3P08754 354 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 MAP2K2P36507 400 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 MTMR14Q8NCE2 650 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 PRMT6Q96LA8 375 aaPredicted RBP13.09□□□□□ -0.31
TMCO1-209ENST00000628579 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
TMCO1-209ENST00000628579 CLRN2A0PK11 232 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 CIAO1O76071 339 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 LBX1P52954 281 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 APOBEC3FQ8IUX4 373 aaKnown RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
TMCO1-209ENST00000628579 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
TMCO1-209ENST00000628579 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
TMCO1-209ENST00000628579 SLC5A1P13866 664 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 RBM5P52756 815 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMCO1-209ENST00000628579 NOGQ13253 232 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 LPIN2Q92539 896 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
TMCO1-209ENST00000628579 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
TMCO1-209ENST00000628579 SLC10A3P09131 477 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 RLBP1P12271 317 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
TMCO1-209ENST00000628579 FKBP1BP68106 108 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 MTX1Q13505 466 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 PRKG1Q13976 671 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 ATP2B3Q16720 1220 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 BEGAINQ9BUH8 593 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 SERPINA10Q9UK55 444 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
TMCO1-209ENST00000628579 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
TMCO1-209ENST00000628579 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 PNMA6EA0A0J9YXQ4 647 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 MYO1BO43795 1136 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 GNAI2P04899 355 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 ADORA1P30542 326 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 CRKP46108 304 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
TMCO1-209ENST00000628579 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
TMCO1-209ENST00000628579 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms