RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
VARS2-213ENST00000625423 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 DCCP43146 1447 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 PRC1O43663 620 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 EVCP57679 992 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
VARS2-213ENST00000625423 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 AKAP2Q9Y2D5 859 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 A0A1B0GVL5 298 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 CCDC94Q9BW85 323 aaPredicted RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 ANO10Q9NW15 660 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 CLIC4Q9Y696 253 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
VARS2-213ENST00000625423 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
VARS2-213ENST00000625423 TNNT1P13805 278 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 MB21D2Q8IYB1 491 aaPredicted RBP13.14□□□□□ -0.31
VARS2-213ENST00000625423 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 IL2RBP14784 551 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 ANTXR2P58335 489 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
VARS2-213ENST00000625423 ADALQ6DHV7 355 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 APPBP2Q92624 585 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
VARS2-213ENST00000625423 NDUFA8P51970 172 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
VARS2-213ENST00000625423 STK38Q15208 465 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
VARS2-213ENST00000625423 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
VARS2-213ENST00000625423 GPAA1O43292 621 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 ZNF213O14771 459 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 CPLX1O14810 134 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
VARS2-213ENST00000625423 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
VARS2-213ENST00000625423 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
VARS2-213ENST00000625423 FBXO18Q8NFZ0 1043 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
VARS2-213ENST00000625423 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
VARS2-213ENST00000625423 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 CSF1RP07333 972 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 EVA1CP58658 441 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
VARS2-213ENST00000625423 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 SPTLC2O15270 562 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 MCAMP43121 646 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
VARS2-213ENST00000625423 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 ZBTB38Q8NAP3 1195 aaPredicted RBP13.11□□□□□ -0.31
VARS2-213ENST00000625423 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 NWD2Q9ULI1 1742 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 SMTNL1A8MU46 457 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
VARS2-213ENST00000625423 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 YEATS4O95619 227 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 SKILP12757 684 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 GPTP24298 496 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 ANKRD7Q92527 254 aa13.11□□□□□ -0.31
VARS2-213ENST00000625423 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms