RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 ZNF34Q8IZ26 560 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 MAST3O60307 1309 aa20.58■□□□□ 0.89
TRA2A-212ENST00000621813 LRP5O75197 1615 aa20.58■□□□□ 0.88
TRA2A-212ENST00000621813 TNNT3P45378 269 aaPredicted RBP20.58■□□□□ 0.88
TRA2A-212ENST00000621813 UVSSAQ2YD98 709 aa20.58■□□□□ 0.88
TRA2A-212ENST00000621813 CERS3Q8IU89 383 aa20.58■□□□□ 0.88
TRA2A-212ENST00000621813 KRT222Q8N1A0 295 aa20.58■□□□□ 0.88
TRA2A-212ENST00000621813 ZNF512BQ96KM6 892 aaPredicted RBP20.58■□□□□ 0.88
TRA2A-212ENST00000621813 GREM2Q9H772 168 aa20.58■□□□□ 0.88
TRA2A-212ENST00000621813 RBM27Q9P2N5 1060 aaKnown RBP20.58■□□□□ 0.88
TRA2A-212ENST00000621813 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 CHGBP05060 677 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 EIF5P55010 431 aaKnown RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 LARP1BQ659C4 914 aaKnown RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 SPATA31A5Q5VU36 1347 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 SPATA31A7Q8IWB4 1347 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 ARAP2Q8WZ64 1704 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 HSPD1P10809 573 aaKnown RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 BARGINQ6ZT62 677 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
TRA2A-212ENST00000621813 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
TRA2A-212ENST00000621813 ZNF831Q5JPB2 1677 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 TPM3P06753 285 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 ADORA1P30542 326 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 UBE2HP62256 183 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 DHX32Q7L7V1 743 aaKnown RBP20.56■□□□□ 0.88
TRA2A-212ENST00000621813 TCEANC2Q96MN5 208 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 AKAP11Q9UKA4 1901 aa20.56■□□□□ 0.88
TRA2A-212ENST00000621813 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-212ENST00000621813 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-212ENST00000621813 Q6ZUG5 572 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 CEP120Q8N960 986 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 TBC1D2BQ9UPU7 963 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 SLIT2O94813 1529 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 LAMB2P55268 1798 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 VPS37CA5D8V6 355 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-212ENST00000621813 COL9A3Q14050 684 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-212ENST00000621813 CNPY4Q8N129 248 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 MYCBPQ99417 103 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-212ENST00000621813 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.55■□□□□ 0.881e-28■■■□□ 16.2
TRA2A-212ENST00000621813 BRMS1Q9HCU9 246 aa20.55■□□□□ 0.88
TRA2A-212ENST00000621813 UBN2Q6ZU65 1347 aa20.54■□□□□ 0.88
TRA2A-212ENST00000621813 SYCE3A1L190 88 aa20.54■□□□□ 0.88
TRA2A-212ENST00000621813 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
TRA2A-212ENST00000621813 ZSCAN25Q6NSZ9 544 aa20.54■□□□□ 0.88
TRA2A-212ENST00000621813 GDPD2Q9HCC8 539 aa20.54■□□□□ 0.88
TRA2A-212ENST00000621813 ATP6V1AP38606 617 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 INTS5Q6P9B9 1019 aaKnown RBP20.53■□□□□ 0.88
TRA2A-212ENST00000621813 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 APPBP2Q92624 585 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 MROH5Q6ZUA9 1318 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 GADD45BO75293 160 aaPredicted RBP20.53■□□□□ 0.88
TRA2A-212ENST00000621813 PDE8BO95263 885 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 SIK1P57059 783 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 PARP10Q53GL7 1025 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 SMARCC1Q92922 1105 aaPredicted RBP20.53■□□□□ 0.88
TRA2A-212ENST00000621813 LLPHQ9BRT6 129 aaKnown RBP20.53■□□□□ 0.88
TRA2A-212ENST00000621813 AGXT2Q9BYV1 514 aa20.53■□□□□ 0.88
TRA2A-212ENST00000621813 COL5A3P25940 1745 aaPredicted RBP20.52■□□□□ 0.88
TRA2A-212ENST00000621813 M0R2C6 588 aa20.52■□□□□ 0.88
TRA2A-212ENST00000621813 CRKLP46109 303 aaKnown RBP20.52■□□□□ 0.88
TRA2A-212ENST00000621813 STOX1Q6ZVD7 989 aa20.52■□□□□ 0.88
TRA2A-212ENST00000621813 MARCH10Q8NA82 808 aaPredicted RBP20.52■□□□□ 0.88
TRA2A-212ENST00000621813 OSBP2Q969R2 916 aa20.52■□□□□ 0.88
TRA2A-212ENST00000621813 RIOK3O14730 519 aaKnown RBP20.51■□□□□ 0.87
TRA2A-212ENST00000621813 ZAP70P43403 619 aa20.51■□□□□ 0.87
TRA2A-212ENST00000621813 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
TRA2A-212ENST00000621813 E7EWF7 191 aa20.51■□□□□ 0.87
TRA2A-212ENST00000621813 KRT85P78386 507 aa20.51■□□□□ 0.87
TRA2A-212ENST00000621813 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
TRA2A-212ENST00000621813 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
TRA2A-212ENST00000621813 FBXL16Q8N461 479 aa20.51■□□□□ 0.87
TRA2A-212ENST00000621813 BCORQ6W2J9 1755 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 UQCRFS1P1P0C7P4 283 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
TRA2A-212ENST00000621813 STK3Q13188 491 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 SCARF1Q14162 830 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 SLFNL1Q499Z3 407 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 BRF1Q92994 677 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 UTP14AQ9BVJ6 771 aaKnown RBP20.5■□□□□ 0.87
TRA2A-212ENST00000621813 ATRNO75882 1429 aa20.5■□□□□ 0.87
TRA2A-212ENST00000621813 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
TRA2A-212ENST00000621813 FIBPO43427 364 aa20.49■□□□□ 0.87
TRA2A-212ENST00000621813 PFKFB2O60825 505 aa20.49■□□□□ 0.87
TRA2A-212ENST00000621813 GTF2A1P52655 376 aaPredicted RBP20.49■□□□□ 0.87
TRA2A-212ENST00000621813 PUM3Q15397 648 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms