RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TNNI3KQ59H18 835 aa15.47■□□□□ 0.07
FOXN3-219ENST00000615335 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
FOXN3-219ENST00000615335 CCDC8Q9H0W5 538 aaPredicted RBP15.47■□□□□ 0.07
FOXN3-219ENST00000615335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
FOXN3-219ENST00000615335 FPGT-TNNI3KV9GXZ4 949 aa15.47■□□□□ 0.07
FOXN3-219ENST00000615335 COL4A1P02462 1669 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 KLRG2A4D1S0 409 aaPredicted RBP15.46■□□□□ 0.07
FOXN3-219ENST00000615335 TULP2O00295 520 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 MCM2P49736 904 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.07
FOXN3-219ENST00000615335 BSDC1Q9NW68 430 aaPredicted RBP15.46■□□□□ 0.07
FOXN3-219ENST00000615335 MROH5Q6ZUA9 1318 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 HELBQ8NG08 1087 aaPredicted RBP15.46■□□□□ 0.07
FOXN3-219ENST00000615335 RILPL2Q969X0 211 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 NEUROD6Q96NK8 337 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 YY1AP1Q9H869 796 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
FOXN3-219ENST00000615335 POLD1P28340 1107 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
FOXN3-219ENST00000615335 GRAPQ13588 217 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 GRAPLQ8TC17 118 aaPredicted RBP15.45■□□□□ 0.06
FOXN3-219ENST00000615335 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 PRPF40AO75400 957 aaKnown RBP15.45■□□□□ 0.06
FOXN3-219ENST00000615335 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■□□ 15.1
FOXN3-219ENST00000615335 CHMLP26374 656 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 TIMM10P62072 90 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 CREBRFQ8IUR6 639 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 TSC1Q92574 1164 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 TMX3Q96JJ7 454 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
FOXN3-219ENST00000615335 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
FOXN3-219ENST00000615335 TAF5LO75529 589 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 PDE8BO95263 885 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 SRGNP10124 158 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 CHRNDQ07001 517 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 GPR108Q9NPR9 543 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 TLR7Q9NYK1 1049 aaKnown RBP15.44■□□□□ 0.06
FOXN3-219ENST00000615335 LRP5O75197 1615 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 A0A1B0GUL7 405 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 SLFN14P0C7P3 912 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 HOXA10P31260 410 aaPredicted RBP15.44■□□□□ 0.06
FOXN3-219ENST00000615335 SYCP1Q15431 976 aa15.44■□□□□ 0.06
FOXN3-219ENST00000615335 H0YIN7 160 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 NPR1P16066 1061 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 ANAPC15P60006 121 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 C2CD5Q86YS7 1000 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 VGLL2Q8N8G2 317 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 GPATCH3Q96I76 525 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 ANO2Q9NQ90 1003 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 MINPP1Q9UNW1 487 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 IGSF3O75054 1194 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.06
FOXN3-219ENST00000615335 CRAMP1Q96RY5 1269 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 DBNLQ9UJU6 430 aaKnown RBP15.43■□□□□ 0.06
FOXN3-219ENST00000615335 AOX1Q06278 1338 aa15.43■□□□□ 0.06
FOXN3-219ENST00000615335 MMP14P50281 582 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 DBNDD2Q9BQY9 259 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 CTIFO43310 598 aaKnown RBP15.42■□□□□ 0.06
FOXN3-219ENST00000615335 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 ECHDC1Q9NTX5 307 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 PALD1Q9ULE6 856 aa15.42■□□□□ 0.06
FOXN3-219ENST00000615335 BBOX1O75936 387 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 CHRNA5P30532 468 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 CUL4AQ13619 759 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 PUM3Q15397 648 aaKnown RBP15.41■□□□□ 0.06
FOXN3-219ENST00000615335 GPT2Q8TD30 523 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 ZNF609O15014 1411 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 TTC41PQ6P2S7 1318 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 SNAP23O00161 211 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 GORABQ5T7V8 394 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
FOXN3-219ENST00000615335 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
FOXN3-219ENST00000615335 LPIN2Q92539 896 aa15.4■□□□□ 0.06
FOXN3-219ENST00000615335 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
FOXN3-219ENST00000615335 ANKRD2Q9GZV1 360 aa15.4■□□□□ 0.06
FOXN3-219ENST00000615335 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
FOXN3-219ENST00000615335 C10orf71Q711Q0 1435 aa15.4■□□□□ 0.06
FOXN3-219ENST00000615335 FOXD4L5Q5VV16 416 aaPredicted RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 FOXD4L4Q8WXT5 416 aaPredicted RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 ANKIB1Q9P2G1 1089 aa15.39■□□□□ 0.05
FOXN3-219ENST00000615335 PPP1R1BQ9UD71 204 aaPredicted RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 PPEF1O14829 653 aaPredicted RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 ADORA1P30542 326 aa15.39■□□□□ 0.05
FOXN3-219ENST00000615335 TERF2Q15554 542 aa15.39■□□□□ 0.05
FOXN3-219ENST00000615335 PI4K2BQ8TCG2 481 aa15.39■□□□□ 0.05
FOXN3-219ENST00000615335 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
FOXN3-219ENST00000615335 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
FOXN3-219ENST00000615335 BRD1O95696 1058 aa15.38■□□□□ 0.05
FOXN3-219ENST00000615335 SLC5A1P13866 664 aa15.38■□□□□ 0.05
FOXN3-219ENST00000615335 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
FOXN3-219ENST00000615335 CLGNO14967 610 aa15.38■□□□□ 0.05
FOXN3-219ENST00000615335 EPB41L2O43491 1005 aaKnown RBP15.38■□□□□ 0.05
FOXN3-219ENST00000615335 GLRX3O76003 335 aaKnown RBP15.38■□□□□ 0.05
FOXN3-219ENST00000615335 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
FOXN3-219ENST00000615335 FGFR2P21802 821 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms