RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LRRFIP1Q32MZ4 808 aaKnown RBP21.2■□□□□ 0.98
SREK1-216ENST00000612404 FAM227BQ96M60 508 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 CD209Q9NNX6 404 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 RFX7Q2KHR2 1363 aa21.2■□□□□ 0.98
SREK1-216ENST00000612404 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
SREK1-216ENST00000612404 CHGBP05060 677 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.19■□□□□ 0.98
SREK1-216ENST00000612404 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 G3V3G9 751 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 GRIPAP1Q4V328 841 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 TDRD7Q8NHU6 1098 aaKnown RBP21.19■□□□□ 0.98
SREK1-216ENST00000612404 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
SREK1-216ENST00000612404 ABCF2Q9UG63 623 aa21.19■□□□□ 0.98
SREK1-216ENST00000612404 IL25Q9H293 177 aa21.18■□□□□ 0.98
SREK1-216ENST00000612404 LRP2BPQ9P2M1 347 aa21.18■□□□□ 0.98
SREK1-216ENST00000612404 BRCA1P38398 1863 aaKnown RBP21.18■□□□□ 0.98
SREK1-216ENST00000612404 A0A0D9SFI3 127 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 RNF113AO15541 343 aaKnown RBP21.17■□□□□ 0.98
SREK1-216ENST00000612404 REC8O95072 547 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 SUPT20HQ8NEM7 779 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 BCS1LQ9Y276 419 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 MYO5AQ9Y4I1 1855 aaKnown RBP21.17■□□□□ 0.98
SREK1-216ENST00000612404 SGSM2O43147 1006 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 IL1R1P14778 569 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 DOK7Q18PE1 504 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 TICAM2Q86XR7 235 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 FHDC1Q9C0D6 1143 aaPredicted RBP21.17■□□□□ 0.98
SREK1-216ENST00000612404 COA1Q9GZY4 146 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 SNED1Q8TER0 1413 aa21.17■□□□□ 0.98
SREK1-216ENST00000612404 PDS5AQ29RF7 1337 aaKnown RBP21.17■□□□□ 0.98
SREK1-216ENST00000612404 MAP3K12Q12852 859 aa21.16■□□□□ 0.98
SREK1-216ENST00000612404 SLC9C2Q5TAH2 1124 aa21.16■□□□□ 0.98
SREK1-216ENST00000612404 ZSCAN25Q6NSZ9 544 aa21.16■□□□□ 0.98
SREK1-216ENST00000612404 ZFYP08048 801 aaPredicted RBP21.16■□□□□ 0.98
SREK1-216ENST00000612404 ANO2Q9NQ90 1003 aa21.16■□□□□ 0.98
SREK1-216ENST00000612404 MYH7P12883 1935 aa21.15■□□□□ 0.98
SREK1-216ENST00000612404 AOC3Q16853 763 aa21.14■□□□□ 0.98
SREK1-216ENST00000612404 SEC62Q99442 399 aaKnown RBP21.14■□□□□ 0.98
SREK1-216ENST00000612404 RAI14Q9P0K7 980 aa21.14■□□□□ 0.98
SREK1-216ENST00000612404 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.97
SREK1-216ENST00000612404 WDR66Q8TBY9 1149 aa21.14■□□□□ 0.97
SREK1-216ENST00000612404 PSMD1Q99460 953 aa21.14■□□□□ 0.97
SREK1-216ENST00000612404 DBNDD1Q9H9R9 158 aa21.14■□□□□ 0.97
SREK1-216ENST00000612404 DOCK2Q92608 1830 aa21.14■□□□□ 0.97
SREK1-216ENST00000612404 ZBTB22O15209 634 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 PDE6AP16499 860 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 ADD2P35612 726 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 ZMYM1Q5SVZ6 1142 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 MAGEB6Q8N7X4 407 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 RBM19Q9Y4C8 960 aaKnown RBP21.13■□□□□ 0.97
SREK1-216ENST00000612404 RAD50Q92878 1312 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 PPIP5K2O43314 1243 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 MCMDC2Q4G0Z9 681 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 FBXW7Q969H0 707 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 HELLSQ9NRZ9 838 aa21.13■□□□□ 0.97
SREK1-216ENST00000612404 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
SREK1-216ENST00000612404 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
SREK1-216ENST00000612404 ZNF532Q9HCE3 1301 aa21.12■□□□□ 0.97
SREK1-216ENST00000612404 CCDC129Q6ZRS4 1044 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 ZNF589Q86UQ0 364 aaPredicted RBP21.11■□□□□ 0.97
SREK1-216ENST00000612404 ZGPATQ8N5A5 531 aaKnown RBP21.11■□□□□ 0.97
SREK1-216ENST00000612404 ZNF277Q9NRM2 450 aaPredicted RBP21.11■□□□□ 0.97
SREK1-216ENST00000612404 GTF2IP78347 998 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 APPBP2Q92624 585 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 OSBP2Q969R2 916 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 USP26Q9BXU7 913 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 CHD4Q14839 1912 aa21.11■□□□□ 0.97
SREK1-216ENST00000612404 SOCS7O14512 581 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 ECE2O60344 883 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 PRDX5P30044 214 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 SPTY2D1Q68D10 685 aaPredicted RBP21.1■□□□□ 0.97
SREK1-216ENST00000612404 PODNQ7Z5L7 613 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 MAST3O60307 1309 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 SALL1Q9NSC2 1324 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 M0R2C6 588 aa21.1■□□□□ 0.97
SREK1-216ENST00000612404 UTRNP46939 3433 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 TCRBV5S4A2TA0A5A2 114 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 LDHBP07195 334 aaKnown RBP21.09■□□□□ 0.97
SREK1-216ENST00000612404 LARGE2Q8N3Y3 721 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 SYT17Q9BSW7 474 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 PUS7LQ9H0K6 701 aaKnown RBP21.09■□□□□ 0.97
SREK1-216ENST00000612404 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 FAM205AQ6ZU69 1335 aa21.09■□□□□ 0.97
SREK1-216ENST00000612404 MFSD14BQ5SR56 506 aa21.08■□□□□ 0.97
SREK1-216ENST00000612404 TTLL5Q6EMB2 1281 aa21.08■□□□□ 0.97
SREK1-216ENST00000612404 LSG1Q9H089 658 aaKnown RBP21.08■□□□□ 0.97
SREK1-216ENST00000612404 TAOK3Q9H2K8 898 aa21.08■□□□□ 0.97
SREK1-216ENST00000612404 CYP7A1P22680 504 aa21.08■□□□□ 0.96
SREK1-216ENST00000612404 MECOMQ03112 1051 aa21.08■□□□□ 0.96
SREK1-216ENST00000612404 NAA16Q6N069 864 aaPredicted RBP21.08■□□□□ 0.96
SREK1-216ENST00000612404 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.96
SREK1-216ENST00000612404 TBC1D22AQ8WUA7 517 aa21.08■□□□□ 0.96
SREK1-216ENST00000612404 PTH1RQ03431 593 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms