RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
HDDC2-210ENST00000609574 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
HDDC2-210ENST00000609574 PSME4Q14997 1843 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 F8W031 263 aaPredicted RBP20.12■□□□□ 0.81
HDDC2-210ENST00000609574 KLRK1P26718 216 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 MAP3K11Q16584 847 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 TAF7LQ5H9L4 462 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 G2E3Q7L622 706 aa20.12■□□□□ 0.81
HDDC2-210ENST00000609574 FKBP1AP62942 108 aaKnown RBP20.11■□□□□ 0.81
HDDC2-210ENST00000609574 ARHGEF6Q15052 776 aa20.11■□□□□ 0.81
HDDC2-210ENST00000609574 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
HDDC2-210ENST00000609574 WNK4Q96J92 1243 aa20.11■□□□□ 0.81
HDDC2-210ENST00000609574 R3HDMLQ9H3Y0 253 aa20.11■□□□□ 0.81
HDDC2-210ENST00000609574 CLRN2A0PK11 232 aa20.1■□□□□ 0.81
HDDC2-210ENST00000609574 TAF5LO75529 589 aa20.1■□□□□ 0.81
HDDC2-210ENST00000609574 C15orf52Q6ZUT6 534 aaKnown RBP20.1■□□□□ 0.81
HDDC2-210ENST00000609574 HELBQ8NG08 1087 aaPredicted RBP20.1■□□□□ 0.81
HDDC2-210ENST00000609574 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 CCDC57Q2TAC2 916 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 ANKRD13AQ8IZ07 590 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
HDDC2-210ENST00000609574 IL16Q14005 1332 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 PLIN1O60240 522 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 IL1R1P14778 569 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 OTOP1Q7RTM1 612 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 CLMNQ96JQ2 1002 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 CNNM1Q9NRU3 951 aa20.08■□□□□ 0.81
HDDC2-210ENST00000609574 WDHD1O75717 1129 aaPredicted RBP20.07■□□□□ 0.8
HDDC2-210ENST00000609574 CASP7P55210 303 aa20.07■□□□□ 0.8
HDDC2-210ENST00000609574 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
HDDC2-210ENST00000609574 CERS5Q8N5B7 392 aa20.07■□□□□ 0.8
HDDC2-210ENST00000609574 PRMT6Q96LA8 375 aaPredicted RBP20.07■□□□□ 0.8
HDDC2-210ENST00000609574 EFCC1Q9HA90 598 aa20.07■□□□□ 0.8
HDDC2-210ENST00000609574 RASA3Q14644 834 aa20.06■□□□□ 0.8
HDDC2-210ENST00000609574 NBPF12Q5TAG4 269 aaPredicted RBP20.06■□□□□ 0.8
HDDC2-210ENST00000609574 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
HDDC2-210ENST00000609574 SNAP23O00161 211 aa20.05■□□□□ 0.8
HDDC2-210ENST00000609574 IGF2BP3O00425 579 aaKnown RBP eCLIP20.05■□□□□ 0.8
HDDC2-210ENST00000609574 USP2O75604 605 aaPredicted RBP20.05■□□□□ 0.8
HDDC2-210ENST00000609574 SP3Q02447 781 aa20.05■□□□□ 0.8
HDDC2-210ENST00000609574 TMEM106CQ9BVX2 250 aa20.05■□□□□ 0.8
HDDC2-210ENST00000609574 TNNI2P48788 182 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 CRHR2Q13324 411 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 LMBR1LQ6UX01 489 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 CD99L2Q8TCZ2 262 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 MYH3P11055 1940 aa20.04■□□□□ 0.8
HDDC2-210ENST00000609574 FOXO4P98177 505 aa20.03■□□□□ 0.8
HDDC2-210ENST00000609574 NBPF11Q86T75 865 aa20.03■□□□□ 0.8
HDDC2-210ENST00000609574 C9orf78Q9NZ63 289 aaPredicted RBP20.03■□□□□ 0.8
HDDC2-210ENST00000609574 HIBADHP31937 336 aaKnown RBP20.02■□□□□ 0.8
HDDC2-210ENST00000609574 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
HDDC2-210ENST00000609574 MFSD14BQ5SR56 506 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 OPTNQ96CV9 577 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 ELP3Q9H9T3 547 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 ZFYVE28Q9HCC9 887 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 SERPINA10Q9UK55 444 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.8
HDDC2-210ENST00000609574 PCDHAC2Q9Y5I4 1007 aa20.02■□□□□ 0.8
HDDC2-210ENST00000609574 TESPA1A2RU30 521 aaPredicted RBP20.01■□□□□ 0.79
HDDC2-210ENST00000609574 VPS37DQ86XT2 251 aa20.01■□□□□ 0.79
HDDC2-210ENST00000609574 ZNF70Q9UC06 446 aaPredicted RBP20.01■□□□□ 0.79
HDDC2-210ENST00000609574 CSADQ9Y600 493 aa20.01■□□□□ 0.79
HDDC2-210ENST00000609574 SPEF2Q9C093 1822 aa20.01■□□□□ 0.79
HDDC2-210ENST00000609574 POTEFA5A3E0 1075 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 GRM8O00222 908 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 VAMP4O75379 141 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 FRAT2O75474 233 aaPredicted RBP20■□□□□ 0.79
HDDC2-210ENST00000609574 GTF2A2P52657 109 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 UBE4AQ14139 1066 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 WDR63Q8IWG1 891 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 IRS2Q9Y4H2 1338 aa20■□□□□ 0.79
HDDC2-210ENST00000609574 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
HDDC2-210ENST00000609574 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
HDDC2-210ENST00000609574 ARMC5Q96C12 935 aa19.99■□□□□ 0.79
HDDC2-210ENST00000609574 ZNF594Q96JF6 807 aaPredicted RBP19.99■□□□□ 0.79
HDDC2-210ENST00000609574 TDRD3Q9H7E2 651 aaKnown RBP19.99■□□□□ 0.79
HDDC2-210ENST00000609574 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
HDDC2-210ENST00000609574 F6X3S4 739 aa19.98■□□□□ 0.79
HDDC2-210ENST00000609574 KIF22Q14807 665 aa19.98■□□□□ 0.79
HDDC2-210ENST00000609574 TAF1CQ15572 869 aaPredicted RBP19.98■□□□□ 0.79
HDDC2-210ENST00000609574 DZIP1LQ8IYY4 767 aaKnown RBP19.98■□□□□ 0.79
HDDC2-210ENST00000609574 TDRD7Q8NHU6 1098 aaKnown RBP19.98■□□□□ 0.79
HDDC2-210ENST00000609574 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
HDDC2-210ENST00000609574 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 TCP10L2B9ZVM9 353 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 GJA5P36382 358 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
HDDC2-210ENST00000609574 CCL15Q16663 113 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 SLC4A8Q2Y0W8 1093 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 HABP4Q5JVS0 413 aaKnown RBP19.97■□□□□ 0.79
HDDC2-210ENST00000609574 HOOK2Q96ED9 719 aa19.97■□□□□ 0.79
HDDC2-210ENST00000609574 PTPN18Q99952 460 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms