RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 HSPA4P34932 840 aa26.37■■□□□ 1.81
USF2-216ENST00000607959 PRPF40BQ6NWY9 871 aaKnown RBP26.37■■□□□ 1.81
USF2-216ENST00000607959 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
USF2-216ENST00000607959 IDH1O75874 414 aaKnown RBP26.36■■□□□ 1.81
USF2-216ENST00000607959 KIAA1211Q6ZU35 1233 aa26.36■■□□□ 1.81
USF2-216ENST00000607959 MAP4K1Q92918 833 aa26.36■■□□□ 1.81
USF2-216ENST00000607959 ZFYP08048 801 aaPredicted RBP26.35■■□□□ 1.81
USF2-216ENST00000607959 C7orf43Q8WVR3 580 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 IL17RAQ96F46 866 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 DENND2AQ9ULE3 1009 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 PSDA5PKW4 1024 aaPredicted RBP26.35■■□□□ 1.81
USF2-216ENST00000607959 SEMA3EO15041 775 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 PDE6AP16499 860 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 KCNA3P22001 575 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 SLC9C2Q5TAH2 1124 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 SGIP1Q9BQI5 828 aa26.35■■□□□ 1.81
USF2-216ENST00000607959 PUS7LQ9H0K6 701 aaKnown RBP26.35■■□□□ 1.81
USF2-216ENST00000607959 PDS5AQ29RF7 1337 aaKnown RBP26.34■■□□□ 1.81
USF2-216ENST00000607959 TDRD7Q8NHU6 1098 aaKnown RBP26.34■■□□□ 1.81
USF2-216ENST00000607959 SNED1Q8TER0 1413 aa26.34■■□□□ 1.81
USF2-216ENST00000607959 APPBP2Q92624 585 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.33■■□□□ 1.811e-6■□□□□ 8.9
USF2-216ENST00000607959 ZNF532Q9HCE3 1301 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 NECTIN1Q15223 517 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 UBE3CQ15386 1083 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 VPS53Q5VIR6 699 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 RASEFQ8IZ41 740 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 MPNDQ8N594 471 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 CNKSR1Q969H4 720 aa26.33■■□□□ 1.81
USF2-216ENST00000607959 FOXP2O15409 715 aa26.32■■□□□ 1.8
USF2-216ENST00000607959 LRRFIP1Q32MZ4 808 aaKnown RBP26.32■■□□□ 1.8
USF2-216ENST00000607959 DDRGK1Q96HY6 314 aa26.32■■□□□ 1.8
USF2-216ENST00000607959 RBM8AQ9Y5S9 174 aaKnown RBP26.32■■□□□ 1.8
USF2-216ENST00000607959 C6orf229H3BNL8 230 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 WASHC4Q2M389 1173 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 KCNB2Q92953 911 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 A0A0G2JLW4 131 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 DPEP1P16444 411 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 ZSCAN25Q6NSZ9 544 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 ZNF384Q8TF68 577 aa26.31■■□□□ 1.8
USF2-216ENST00000607959 GOLGB1Q14789 3259 aaKnown RBP26.31■■□□□ 1.8
USF2-216ENST00000607959 SLC4A3P48751 1232 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 ZNF804AQ7Z570 1209 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 MAGEB6Q8N7X4 407 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 CD209Q9NNX6 404 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 SNX14Q9Y5W7 946 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 CHD4Q14839 1912 aa26.3■■□□□ 1.8
USF2-216ENST00000607959 CD2BP2O95400 341 aaKnown RBP26.29■■□□□ 1.8
USF2-216ENST00000607959 ANAPC15P60006 121 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 MAP3K12Q12852 859 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 JAG2Q9Y219 1238 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 IL1R1P14778 569 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 MCCP23508 829 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 CHAF1AQ13111 956 aaPredicted RBP26.29■■□□□ 1.8
USF2-216ENST00000607959 DPP8Q6V1X1 898 aaPredicted RBP26.29■■□□□ 1.8
USF2-216ENST00000607959 TBC1D2Q9BYX2 928 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 ZNF219Q9P2Y4 722 aaPredicted RBP26.29■■□□□ 1.8
USF2-216ENST00000607959 ABCF2Q9UG63 623 aa26.29■■□□□ 1.8
USF2-216ENST00000607959 ILDR2Q71H61 639 aa26.28■■□□□ 1.8
USF2-216ENST00000607959 LRP2BPQ9P2M1 347 aa26.28■■□□□ 1.8
USF2-216ENST00000607959 TAF6LQ9Y6J9 622 aa26.28■■□□□ 1.8
USF2-216ENST00000607959 FRAT2O75474 233 aaPredicted RBP26.27■■□□□ 1.8
USF2-216ENST00000607959 PTGER2P43116 358 aa26.27■■□□□ 1.8
USF2-216ENST00000607959 HSPD1P10809 573 aaKnown RBP26.27■■□□□ 1.8
USF2-216ENST00000607959 POLD1P28340 1107 aa26.27■■□□□ 1.8
USF2-216ENST00000607959 RABEP1Q15276 862 aa26.27■■□□□ 1.8
USF2-216ENST00000607959 ADGRA1Q86SQ6 560 aa26.27■■□□□ 1.8
USF2-216ENST00000607959 RIMBP2O15034 1052 aa26.26■■□□□ 1.79
USF2-216ENST00000607959 GPAA1O43292 621 aa26.26■■□□□ 1.79
USF2-216ENST00000607959 CREB3L3Q68CJ9 461 aa26.26■■□□□ 1.79
USF2-216ENST00000607959 SLC27A2O14975 620 aa26.26■■□□□ 1.79
USF2-216ENST00000607959 DSCC1Q9BVC3 393 aa26.26■■□□□ 1.79
USF2-216ENST00000607959 RTFDC1Q9BY42 306 aaPredicted RBP26.25■■□□□ 1.79
USF2-216ENST00000607959 SALL1Q9NSC2 1324 aa26.25■■□□□ 1.79
USF2-216ENST00000607959 PRDX5P30044 214 aa26.24■■□□□ 1.79
USF2-216ENST00000607959 GRIK5Q16478 980 aa26.24■■□□□ 1.79
USF2-216ENST00000607959 TTLL6Q8N841 843 aa26.24■■□□□ 1.79
USF2-216ENST00000607959 SNX21Q969T3 373 aa26.24■■□□□ 1.79
USF2-216ENST00000607959 RAI14Q9P0K7 980 aa26.24■■□□□ 1.79
USF2-216ENST00000607959 C21orf2O43822 256 aa26.23■■□□□ 1.79
USF2-216ENST00000607959 COL9A3Q14050 684 aaPredicted RBP26.23■■□□□ 1.79
USF2-216ENST00000607959 NSUN4Q96CB9 384 aaKnown RBP26.23■■□□□ 1.79
USF2-216ENST00000607959 BRCA1P38398 1863 aaKnown RBP26.23■■□□□ 1.79
USF2-216ENST00000607959 TGFB2P61812 414 aa26.22■■□□□ 1.79
USF2-216ENST00000607959 ADCK5Q3MIX3 580 aa26.22■■□□□ 1.79
USF2-216ENST00000607959 STRBPQ96SI9 672 aaKnown RBP26.22■■□□□ 1.79
USF2-216ENST00000607959 U3KPZ7 1027 aaPredicted RBP26.22■■□□□ 1.79
USF2-216ENST00000607959 MAST2Q6P0Q8 1798 aa26.22■■□□□ 1.79
USF2-216ENST00000607959 CYP7A1P22680 504 aa26.22■■□□□ 1.79
USF2-216ENST00000607959 MECOMQ03112 1051 aa26.22■■□□□ 1.79
USF2-216ENST00000607959 TMX4Q9H1E5 349 aaPredicted RBP26.22■■□□□ 1.79
USF2-216ENST00000607959 ERICH6Q7L0X2 663 aa26.21■■□□□ 1.79
USF2-216ENST00000607959 WDR66Q8TBY9 1149 aa26.21■■□□□ 1.79
USF2-216ENST00000607959 ZC3H12CQ9C0D7 883 aaKnown RBP26.21■■□□□ 1.79
USF2-216ENST00000607959 COA1Q9GZY4 146 aa26.21■■□□□ 1.79
USF2-216ENST00000607959 MBD4O95243 580 aa26.2■■□□□ 1.79
USF2-216ENST00000607959 CCDC88AQ3V6T2 1871 aa26.2■■□□□ 1.78
USF2-216ENST00000607959 CYP21A2P08686 494 aa26.2■■□□□ 1.78
USF2-216ENST00000607959 DOK7Q18PE1 504 aa26.2■■□□□ 1.78
USF2-216ENST00000607959 TTLL5Q6EMB2 1281 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 1131.3 ms