RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 CERS5Q8N5B7 392 aa28.41■■■□□ 2.14
SNX5-217ENST00000606557 RHPN1Q8TCX5 695 aa28.41■■■□□ 2.14
SNX5-217ENST00000606557 ADARB2Q9NS39 739 aaKnown RBP28.41■■■□□ 2.14
SNX5-217ENST00000606557 TOMM70O94826 608 aa28.4■■■□□ 2.14
SNX5-217ENST00000606557 FKBP1AP62942 108 aaKnown RBP28.4■■■□□ 2.14
SNX5-217ENST00000606557 CCDC102BQ68D86 513 aa28.4■■■□□ 2.14
SNX5-217ENST00000606557 PNMA8AQ86V59 439 aaPredicted RBP28.4■■■□□ 2.14
SNX5-217ENST00000606557 H7C1D1 291 aa28.39■■■□□ 2.14
SNX5-217ENST00000606557 RAB11FIP3O75154 756 aa28.39■■■□□ 2.14
SNX5-217ENST00000606557 POTEIP0CG38 1075 aa28.39■■■□□ 2.14
SNX5-217ENST00000606557 POTEJP0CG39 1038 aa28.39■■■□□ 2.14
SNX5-217ENST00000606557 IRX6P78412 446 aaPredicted RBP28.39■■■□□ 2.14
SNX5-217ENST00000606557 KIF1BPQ96EK5 621 aa28.39■■■□□ 2.14
SNX5-217ENST00000606557 GNL3LQ9NVN8 582 aaKnown RBP28.39■■■□□ 2.14
SNX5-217ENST00000606557 AKAP11Q9UKA4 1901 aa28.39■■■□□ 2.13
SNX5-217ENST00000606557 ZBTB22O15209 634 aa28.38■■■□□ 2.13
SNX5-217ENST00000606557 FRAT2O75474 233 aaPredicted RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 ZNF280AP59817 542 aaPredicted RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 EAPPQ56P03 285 aaPredicted RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 USP50Q70EL3 339 aaPredicted RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 RBM46Q8TBY0 533 aaKnown RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 EAF2Q96CJ1 260 aaPredicted RBP28.38■■■□□ 2.13
SNX5-217ENST00000606557 APBB1O00213 710 aa28.37■■■□□ 2.13
SNX5-217ENST00000606557 USP17L8P0C7I0 530 aa28.37■■■□□ 2.13
SNX5-217ENST00000606557 CHAF1AQ13111 956 aaPredicted RBP28.37■■■□□ 2.13
SNX5-217ENST00000606557 DCTPP1Q9H773 170 aa28.37■■■□□ 2.13
SNX5-217ENST00000606557 ECM29Q5VYK3 1845 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 SEMA3EO15041 775 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 MFSD14BQ5SR56 506 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 TRPM4Q8TD43 1214 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 DBNDD2Q9BQY9 259 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 IL1RAPL2Q9NP60 686 aa28.36■■■□□ 2.13
SNX5-217ENST00000606557 GORABQ5T7V8 394 aa28.35■■■□□ 2.13
SNX5-217ENST00000606557 SAMD7Q7Z3H4 446 aa28.35■■■□□ 2.13
SNX5-217ENST00000606557 LDHDQ86WU2 507 aa28.35■■■□□ 2.13
SNX5-217ENST00000606557 KIAA0825Q8IV33 1275 aa28.35■■■□□ 2.13
SNX5-217ENST00000606557 DBNLQ9UJU6 430 aaKnown RBP28.35■■■□□ 2.13
SNX5-217ENST00000606557 POLR2AP24928 1970 aaKnown RBP28.34■■■□□ 2.13
SNX5-217ENST00000606557 EGFRP00533 1210 aa28.34■■■□□ 2.13
SNX5-217ENST00000606557 TBC1D22AQ8WUA7 517 aa28.34■■■□□ 2.13
SNX5-217ENST00000606557 TLR7Q9NYK1 1049 aaKnown RBP28.34■■■□□ 2.13
SNX5-217ENST00000606557 DENND2AQ9ULE3 1009 aa28.34■■■□□ 2.13
SNX5-217ENST00000606557 ARID4AP29374 1257 aaPredicted RBP28.33■■■□□ 2.13
SNX5-217ENST00000606557 HIRAP54198 1017 aaPredicted RBP28.33■■■□□ 2.13
SNX5-217ENST00000606557 RASGRF1Q13972 1273 aa28.33■■■□□ 2.13
SNX5-217ENST00000606557 TBC1D10BQ4KMP7 808 aaPredicted RBP28.33■■■□□ 2.13
SNX5-217ENST00000606557 AACSQ86V21 672 aa28.33■■■□□ 2.13
SNX5-217ENST00000606557 CCDC8Q9H0W5 538 aaPredicted RBP28.33■■■□□ 2.13
SNX5-217ENST00000606557 MMP14P50281 582 aa28.32■■■□□ 2.12
SNX5-217ENST00000606557 HDAC1Q13547 482 aaPredicted RBP28.32■■■□□ 2.12
SNX5-217ENST00000606557 KIF4BQ2VIQ3 1234 aa28.32■■■□□ 2.12
SNX5-217ENST00000606557 CLASRPQ8N2M8 674 aaKnown RBP28.32■■■□□ 2.12
SNX5-217ENST00000606557 OGFOD1Q8N543 542 aa28.32■■■□□ 2.12
SNX5-217ENST00000606557 SMC1BQ8NDV3 1235 aa28.32■■■□□ 2.12
SNX5-217ENST00000606557 MYOZ2Q9NPC6 264 aa28.32■■■□□ 2.12
SNX5-217ENST00000606557 PDS5AQ29RF7 1337 aaKnown RBP28.32■■■□□ 2.12
SNX5-217ENST00000606557 WDR66Q8TBY9 1149 aa28.31■■■□□ 2.12
SNX5-217ENST00000606557 LRRCC1Q9C099 1032 aa28.31■■■□□ 2.12
SNX5-217ENST00000606557 F8W031 263 aaPredicted RBP28.3■■■□□ 2.12
SNX5-217ENST00000606557 GRIK5Q16478 980 aa28.3■■■□□ 2.12
SNX5-217ENST00000606557 RBM26Q5T8P6 1007 aaKnown RBP28.3■■■□□ 2.12
SNX5-217ENST00000606557 CHADLQ6NUI6 762 aa28.3■■■□□ 2.12
SNX5-217ENST00000606557 HDAC9Q9UKV0 1011 aa28.3■■■□□ 2.12
SNX5-217ENST00000606557 CLEC11AQ9Y240 323 aa28.3■■■□□ 2.12
SNX5-217ENST00000606557 MYO5AQ9Y4I1 1855 aaKnown RBP28.29■■■□□ 2.12
SNX5-217ENST00000606557 UQCRFS1P1P0C7P4 283 aa28.29■■■□□ 2.12
SNX5-217ENST00000606557 FSTL1Q12841 308 aa28.29■■■□□ 2.12
SNX5-217ENST00000606557 CCDC158Q5M9N0 1113 aa28.29■■■□□ 2.12
SNX5-217ENST00000606557 TTC39AQ5SRH9 613 aa28.29■■■□□ 2.12
SNX5-217ENST00000606557 SALL1Q9NSC2 1324 aa28.28■■■□□ 2.12
SNX5-217ENST00000606557 MCAMP43121 646 aa28.28■■■□□ 2.12
SNX5-217ENST00000606557 C1QTNF8P60827 252 aa28.28■■■□□ 2.12
SNX5-217ENST00000606557 SCARF1Q14162 830 aa28.28■■■□□ 2.12
SNX5-217ENST00000606557 HMG20BQ9P0W2 317 aa28.28■■■□□ 2.12
SNX5-217ENST00000606557 SMARCA5O60264 1052 aaPredicted RBP28.27■■■□□ 2.12
SNX5-217ENST00000606557 ZC3H15Q8WU90 426 aaKnown RBP28.27■■■□□ 2.12
SNX5-217ENST00000606557 ZNF512BQ96KM6 892 aaPredicted RBP28.27■■■□□ 2.12
SNX5-217ENST00000606557 PGAP2Q9UHJ9 254 aa28.27■■■□□ 2.12
SNX5-217ENST00000606557 TTF2Q9UNY4 1162 aaKnown RBP28.27■■■□□ 2.12
SNX5-217ENST00000606557 SUGT1Q9Y2Z0 365 aa28.27■■■□□ 2.12
SNX5-217ENST00000606557 MYH2Q9UKX2 1941 aa28.26■■■□□ 2.11
SNX5-217ENST00000606557 PI16Q6UXB8 463 aa28.26■■■□□ 2.11
SNX5-217ENST00000606557 SPATA5Q8NB90 893 aa28.26■■■□□ 2.11
SNX5-217ENST00000606557 MAST2Q6P0Q8 1798 aa28.25■■■□□ 2.11
SNX5-217ENST00000606557 IFIT2P09913 472 aaKnown RBP28.25■■■□□ 2.11
SNX5-217ENST00000606557 MAP1SQ66K74 1059 aaPredicted RBP28.25■■■□□ 2.11
SNX5-217ENST00000606557 ZBED3Q96IU2 234 aaPredicted RBP28.25■■■□□ 2.11
SNX5-217ENST00000606557 DOCK2Q92608 1830 aa28.25■■■□□ 2.11
SNX5-217ENST00000606557 TRPM7Q96QT4 1865 aa28.24■■■□□ 2.11
SNX5-217ENST00000606557 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
SNX5-217ENST00000606557 MTMR14Q8NCE2 650 aa28.24■■■□□ 2.11
SNX5-217ENST00000606557 BCL11AQ9H165 835 aa28.24■■■□□ 2.11
SNX5-217ENST00000606557 ASTN2O75129 1339 aaPredicted RBP28.23■■■□□ 2.11
SNX5-217ENST00000606557 WNT10BO00744 389 aa28.23■■■□□ 2.11
SNX5-217ENST00000606557 PRDX5P30044 214 aa28.23■■■□□ 2.11
SNX5-217ENST00000606557 NBPF9Q3BBW0 867 aa28.23■■■□□ 2.11
SNX5-217ENST00000606557 ZGPATQ8N5A5 531 aaKnown RBP28.23■■■□□ 2.11
SNX5-217ENST00000606557 GCC1Q96CN9 775 aa28.23■■■□□ 2.11
SNX5-217ENST00000606557 RWDD1Q9H446 243 aaPredicted RBP28.23■■■□□ 2.11
SNX5-217ENST00000606557 SERPINA10Q9UK55 444 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms