RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-211ENST00000595945 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
SHKBP1-211ENST00000595945 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-211ENST00000595945 PSME4Q14997 1843 aa17.83■□□□□ 0.44
SHKBP1-211ENST00000595945 SCN9AQ15858 1988 aa17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 CD209Q9NNX6 404 aa17.82■□□□□ 0.44
SHKBP1-211ENST00000595945 C21orf2O43822 256 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 CHGBP05060 677 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 ZFYP08048 801 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 CCDC93Q567U6 631 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 EYA3Q99504 573 aa17.81■□□□□ 0.44
SHKBP1-211ENST00000595945 SALL1Q9NSC2 1324 aa17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 REC8O95072 547 aa17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 COA1Q9GZY4 146 aa17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-211ENST00000595945 ADD2P35612 726 aa17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 SUPT20HQ8NEM7 779 aa17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 PSMD1Q99460 953 aa17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.442e-8■■■■■ 26.9
SHKBP1-211ENST00000595945 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
SHKBP1-211ENST00000595945 FAM205AQ6ZU69 1335 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 TCRBV5S4A2TA0A5A2 114 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 IGSF3O75054 1194 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 PDE6AP16499 860 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 ZSCAN25Q6NSZ9 544 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 LSG1Q9H089 658 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 PPP1R1BQ9UD71 204 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 WWC3Q9ULE0 1092 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 MYH2Q9UKX2 1941 aa17.78■□□□□ 0.44
SHKBP1-211ENST00000595945 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 MAP3K12Q12852 859 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 SLFNL1Q499Z3 407 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 WDR66Q8TBY9 1149 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 APPBP2Q92624 585 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
SHKBP1-211ENST00000595945 MAST3O60307 1309 aa17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 SLC9C2Q5TAH2 1124 aa17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-211ENST00000595945 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-211ENST00000595945 VPS33BQ9H267 617 aa17.75■□□□□ 0.43
SHKBP1-211ENST00000595945 LRP2BPQ9P2M1 347 aa17.75■□□□□ 0.43
SHKBP1-211ENST00000595945 CCDC171Q6TFL3 1326 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 M0R2C6 588 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 PTH1RQ03431 593 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 ZGPATQ8N5A5 531 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 ZNF384Q8TF68 577 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 COL4A5P29400 1685 aa17.74■□□□□ 0.43
SHKBP1-211ENST00000595945 DICER1Q9UPY3 1922 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 AOC3Q16853 763 aa17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 DOK7Q18PE1 504 aa17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 FHDC1Q9C0D6 1143 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 PUS7LQ9H0K6 701 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-211ENST00000595945 CDK5RAP2Q96SN8 1893 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 ECE2O60344 883 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 PRDX5P30044 214 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 KIAA1211Q6ZU35 1233 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 JAG2Q9Y219 1238 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
SHKBP1-211ENST00000595945 SBF1O95248 1867 aa17.71■□□□□ 0.43
SHKBP1-211ENST00000595945 NFKBIEO00221 500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms