RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 H7C1D1 291 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 EGFRP00533 1210 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 GYG1P46976 350 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 NUCB1Q02818 461 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 TBC1D10BQ4KMP7 808 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 USP50Q70EL3 339 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-220ENST00000593008 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
DDX39A-220ENST00000593008 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-220ENST00000593008 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDX39A-220ENST00000593008 PUM3Q15397 648 aaKnown RBP11.87□□□□□ -0.51
DDX39A-220ENST00000593008 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-220ENST00000593008 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 CHD1LQ86WJ1 897 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 DNAJC5GQ8N7S2 189 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
DDX39A-220ENST00000593008 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 TRAF5O00463 557 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
DDX39A-220ENST00000593008 PHKA1P46020 1223 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 BCAMP50895 628 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 SCARF1Q14162 830 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-220ENST00000593008 PI16Q6UXB8 463 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 DPF2Q92785 391 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 XAGE2Q96GT9 111 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
DDX39A-220ENST00000593008 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
DDX39A-220ENST00000593008 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
DDX39A-220ENST00000593008 HSP90AB4PQ58FF6 505 aa11.85□□□□□ -0.51
DDX39A-220ENST00000593008 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-220ENST00000593008 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
DDX39A-220ENST00000593008 SLC5A1P13866 664 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 RGS3P49796 1198 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 GTF2IP78347 998 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 KIF4BQ2VIQ3 1234 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 TTLL5Q6EMB2 1281 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 DLK2Q6UY11 383 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 LPIN2Q92539 896 aa11.84□□□□□ -0.51
DDX39A-220ENST00000593008 FAM84BQ96KN1 310 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-220ENST00000593008 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-220ENST00000593008 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.51
DDX39A-220ENST00000593008 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-220ENST00000593008 USP17L8P0C7I0 530 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 CCDC102BQ68D86 513 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
DDX39A-220ENST00000593008 AGBL3Q8NEM8 1001 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 KLRG1Q96E93 195 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
DDX39A-220ENST00000593008 GMLQ99445 158 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 SNRKQ9NRH2 765 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
DDX39A-220ENST00000593008 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
DDX39A-220ENST00000593008 TMEM88BA6NKF7 163 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
DDX39A-220ENST00000593008 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
DDX39A-220ENST00000593008 ZNF280AP59817 542 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-220ENST00000593008 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
DDX39A-220ENST00000593008 USP48Q86UV5 1035 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
DDX39A-220ENST00000593008 ZNF408Q9H9D4 720 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 PGAP2Q9UHJ9 254 aa11.82□□□□□ -0.52
DDX39A-220ENST00000593008 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-220ENST00000593008 CHGBP05060 677 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 IL1R1P14778 569 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 MX1P20591 662 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
DDX39A-220ENST00000593008 MCAMP43121 646 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-220ENST00000593008 GRIK5Q16478 980 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 CST9Q5W186 159 aa11.81□□□□□ -0.52
DDX39A-220ENST00000593008 FBXO33Q7Z6M2 555 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms