RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DOCK2Q92608 1830 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 GOLIM4O00461 696 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 KIAA2012Q0VF49 1180 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 AOC3Q16853 763 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 VPS33BQ9H267 617 aa27.47■■□□□ 1.99
ACTN4-210ENST00000588618 MYH7P12883 1935 aa27.46■■□□□ 1.99
ACTN4-210ENST00000588618 ZNF277Q9NRM2 450 aaPredicted RBP27.46■■□□□ 1.99
ACTN4-210ENST00000588618 CYP2E1P05181 493 aaPredicted RBP27.45■■□□□ 1.99
ACTN4-210ENST00000588618 TTF1Q15361 905 aaPredicted RBP27.45■■□□□ 1.99
ACTN4-210ENST00000588618 DOK7Q18PE1 504 aa27.45■■□□□ 1.99
ACTN4-210ENST00000588618 IL1R1P14778 569 aa27.44■■□□□ 1.98
ACTN4-210ENST00000588618 LARGE2Q8N3Y3 721 aa27.44■■□□□ 1.98
ACTN4-210ENST00000588618 TDRD7Q8NHU6 1098 aaKnown RBP27.44■■□□□ 1.98
ACTN4-210ENST00000588618 SCN9AQ15858 1988 aa27.44■■□□□ 1.98
ACTN4-210ENST00000588618 COL4A5P29400 1685 aa27.44■■□□□ 1.98
ACTN4-210ENST00000588618 CHAF1AQ13111 956 aaPredicted RBP27.44■■□□□ 1.98
ACTN4-210ENST00000588618 FSD1Q9BTV5 496 aa27.44■■□□□ 1.98
ACTN4-210ENST00000588618 ARHGAP27Q6ZUM4 889 aa27.43■■□□□ 1.98
ACTN4-210ENST00000588618 PODNQ7Z5L7 613 aa27.43■■□□□ 1.98
ACTN4-210ENST00000588618 DBNDD1Q9H9R9 158 aa27.43■■□□□ 1.98
ACTN4-210ENST00000588618 ZNF646O15015 1829 aaPredicted RBP27.42■■□□□ 1.98
ACTN4-210ENST00000588618 NFKBIEO00221 500 aa27.42■■□□□ 1.98
ACTN4-210ENST00000588618 CHGBP05060 677 aa27.42■■□□□ 1.98
ACTN4-210ENST00000588618 IARSP41252 1262 aaKnown RBP27.42■■□□□ 1.98
ACTN4-210ENST00000588618 LTBP3Q9NS15 1303 aa27.42■■□□□ 1.98
ACTN4-210ENST00000588618 ZBTB22O15209 634 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 CASC1Q6TDU7 716 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 TBC1D9Q6ZT07 1266 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 PIH1D3Q9NQM4 214 aaKnown RBP27.41■■□□□ 1.98
ACTN4-210ENST00000588618 PDS5AQ29RF7 1337 aaKnown RBP27.41■■□□□ 1.98
ACTN4-210ENST00000588618 ECE2O60344 883 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 LRRFIP1Q32MZ4 808 aaKnown RBP27.41■■□□□ 1.98
ACTN4-210ENST00000588618 KBTBD3Q8NAB2 608 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 JAG2Q9Y219 1238 aa27.41■■□□□ 1.98
ACTN4-210ENST00000588618 CDC45O75419 566 aa27.4■■□□□ 1.98
ACTN4-210ENST00000588618 NIM1KQ8IY84 436 aa27.4■■□□□ 1.98
ACTN4-210ENST00000588618 WDR66Q8TBY9 1149 aa27.4■■□□□ 1.98
ACTN4-210ENST00000588618 FBXW7Q969H0 707 aa27.4■■□□□ 1.98
ACTN4-210ENST00000588618 GPR162Q16538 588 aa27.39■■□□□ 1.98
ACTN4-210ENST00000588618 CCDC88AQ3V6T2 1871 aa27.39■■□□□ 1.98
ACTN4-210ENST00000588618 ZGPATQ8N5A5 531 aaKnown RBP27.39■■□□□ 1.98
ACTN4-210ENST00000588618 JDP2Q8WYK2 163 aa27.39■■□□□ 1.98
ACTN4-210ENST00000588618 ABCF2Q9UG63 623 aa27.39■■□□□ 1.98
ACTN4-210ENST00000588618 CHMLP26374 656 aa27.38■■□□□ 1.97
ACTN4-210ENST00000588618 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.38■■□□□ 1.972e-6■■□□□ 12.7
ACTN4-210ENST00000588618 LRP2BPQ9P2M1 347 aa27.38■■□□□ 1.97
ACTN4-210ENST00000588618 RASSF7Q02833 373 aa27.38■■□□□ 1.97
ACTN4-210ENST00000588618 SLFNL1Q499Z3 407 aa27.38■■□□□ 1.97
ACTN4-210ENST00000588618 BACH2Q9BYV9 841 aa27.38■■□□□ 1.97
ACTN4-210ENST00000588618 IDH1O75874 414 aaKnown RBP27.37■■□□□ 1.97
ACTN4-210ENST00000588618 YBX3P16989 372 aaKnown RBP eCLIP27.37■■□□□ 1.972e-8■□□□□ 11.3
ACTN4-210ENST00000588618 HIP1O00291 1037 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 GTF2IP78347 998 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 TTLL5Q6EMB2 1281 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 TBC1D22AQ8WUA7 517 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 IL25Q9H293 177 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 SEC24BO95487 1268 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 PRELPP51888 382 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 MAP3K12Q12852 859 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 DIAPH3Q9NSV4 1193 aa27.36■■□□□ 1.97
ACTN4-210ENST00000588618 PSME4Q14997 1843 aa27.35■■□□□ 1.97
ACTN4-210ENST00000588618 SPTY2D1Q68D10 685 aaPredicted RBP27.35■■□□□ 1.97
ACTN4-210ENST00000588618 ZSCAN25Q6NSZ9 544 aa27.35■■□□□ 1.97
ACTN4-210ENST00000588618 KCNQ5Q9NR82 932 aa27.35■■□□□ 1.97
ACTN4-210ENST00000588618 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
ACTN4-210ENST00000588618 MFSD14BQ5SR56 506 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 ERICH6Q7L0X2 663 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 TICAM2Q86XR7 235 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 RAI14Q9P0K7 980 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 ZNRF3Q9ULT6 936 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 FAM205AQ6ZU69 1335 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 SALL1Q9NSC2 1324 aa27.33■■□□□ 1.97
ACTN4-210ENST00000588618 YDJCA8MPS7 323 aa27.33■■□□□ 1.96
ACTN4-210ENST00000588618 FAM227BQ96M60 508 aa27.33■■□□□ 1.96
ACTN4-210ENST00000588618 SBF1O95248 1867 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 USP17L3A6NCW0 530 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 USP17L4A6NCW7 530 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 GRIN3BO60391 1043 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 ZFYP08048 801 aaPredicted RBP27.32■■□□□ 1.96
ACTN4-210ENST00000588618 LMNB1P20700 586 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 GRIK5Q16478 980 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 USP17L1Q7RTZ2 530 aa27.32■■□□□ 1.96
ACTN4-210ENST00000588618 A0A0D9SFI3 127 aa27.31■■□□□ 1.96
ACTN4-210ENST00000588618 LDHBP07195 334 aaKnown RBP27.31■■□□□ 1.96
ACTN4-210ENST00000588618 NMIQ13287 307 aaPredicted RBP27.31■■□□□ 1.96
ACTN4-210ENST00000588618 SLC9C2Q5TAH2 1124 aa27.31■■□□□ 1.96
ACTN4-210ENST00000588618 STRIP1Q5VSL9 837 aa27.31■■□□□ 1.96
ACTN4-210ENST00000588618 MAST2Q6P0Q8 1798 aa27.31■■□□□ 1.96
ACTN4-210ENST00000588618 PRDX5P30044 214 aa27.3■■□□□ 1.96
ACTN4-210ENST00000588618 CWC27Q6UX04 472 aaKnown RBP27.3■■□□□ 1.96
ACTN4-210ENST00000588618 ZNF384Q8TF68 577 aa27.3■■□□□ 1.96
ACTN4-210ENST00000588618 DZIP1Q86YF9 867 aaKnown RBP27.3■■□□□ 1.96
ACTN4-210ENST00000588618 RUFY2Q8WXA3 655 aa27.3■■□□□ 1.96
ACTN4-210ENST00000588618 RNF113AO15541 343 aaKnown RBP27.29■■□□□ 1.96
ACTN4-210ENST00000588618 SEC62Q99442 399 aaKnown RBP27.29■■□□□ 1.96
ACTN4-210ENST00000588618 ESYT1Q9BSJ8 1104 aa27.29■■□□□ 1.96
ACTN4-210ENST00000588618 ADD2P35612 726 aa27.28■■□□□ 1.96
ACTN4-210ENST00000588618 MXD3Q9BW11 206 aa27.28■■□□□ 1.96
ACTN4-210ENST00000588618 DICER1Q9UPY3 1922 aaKnown RBP27.28■■□□□ 1.96
ACTN4-210ENST00000588618 TCRBV5S4A2TA0A5A2 114 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms