RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TDRD7Q8NHU6 1098 aaKnown RBP29.17■■■□□ 2.26
LSM7-204ENST00000587502 CTCFP49711 727 aaPredicted RBP29.16■■■□□ 2.26
LSM7-204ENST00000587502 CAVIN4Q5BKX8 364 aa29.16■■■□□ 2.26
LSM7-204ENST00000587502 FAM84BQ96KN1 310 aaPredicted RBP29.16■■■□□ 2.26
LSM7-204ENST00000587502 BEGAINQ9BUH8 593 aa29.16■■■□□ 2.26
LSM7-204ENST00000587502 FBXO3Q9UK99 471 aa29.16■■■□□ 2.26
LSM7-204ENST00000587502 FAM205AQ6ZU69 1335 aa29.16■■■□□ 2.26
LSM7-204ENST00000587502 FOXN1O15353 648 aa29.15■■■□□ 2.26
LSM7-204ENST00000587502 GYG1P46976 350 aa29.15■■■□□ 2.26
LSM7-204ENST00000587502 KLHDC4Q8TBB5 520 aa29.15■■■□□ 2.26
LSM7-204ENST00000587502 EYA2O00167 538 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 GNAI3P08754 354 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 RFX5P48382 616 aaPredicted RBP29.14■■■□□ 2.26
LSM7-204ENST00000587502 FKBP1BP68106 108 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 DLGAP5Q15398 846 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 CERS5Q8N5B7 392 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 VGLL2Q8N8G2 317 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 MTMR14Q8NCE2 650 aa29.14■■■□□ 2.26
LSM7-204ENST00000587502 THSD7BQ9C0I4 1608 aa29.13■■■□□ 2.25
LSM7-204ENST00000587502 PTPN12Q05209 780 aaKnown RBP29.13■■■□□ 2.25
LSM7-204ENST00000587502 ATF7IPQ6VMQ6 1270 aa29.13■■■□□ 2.25
LSM7-204ENST00000587502 FBXO33Q7Z6M2 555 aa29.13■■■□□ 2.25
LSM7-204ENST00000587502 APOBEC3FQ8IUX4 373 aaKnown RBP29.13■■■□□ 2.25
LSM7-204ENST00000587502 ZBED3Q96IU2 234 aaPredicted RBP29.13■■■□□ 2.25
LSM7-204ENST00000587502 PUM3Q15397 648 aaKnown RBP29.12■■■□□ 2.25
LSM7-204ENST00000587502 RGMBQ6NW40 437 aa29.12■■■□□ 2.25
LSM7-204ENST00000587502 CCDC102AQ96A19 550 aa29.12■■■□□ 2.25
LSM7-204ENST00000587502 LRRFIP2Q9Y608 721 aaKnown RBP29.12■■■□□ 2.25
LSM7-204ENST00000587502 IFIT1P09914 478 aaKnown RBP29.11■■■□□ 2.25
LSM7-204ENST00000587502 NOGQ13253 232 aa29.11■■■□□ 2.25
LSM7-204ENST00000587502 FRAT1Q92837 279 aaPredicted RBP29.11■■■□□ 2.25
LSM7-204ENST00000587502 PRDM10Q9NQV6 1147 aa29.11■■■□□ 2.25
LSM7-204ENST00000587502 ZBED9Q6R2W3 1325 aa29.11■■■□□ 2.25
LSM7-204ENST00000587502 MYO1BO43795 1136 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 AOC2O75106 756 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 BCAR3O75815 825 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 CIAO1O76071 339 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 MFSD14BQ5SR56 506 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 MEIS3Q99687 375 aa29.1■■■□□ 2.25
LSM7-204ENST00000587502 F8W031 263 aaPredicted RBP29.09■■■□□ 2.25
LSM7-204ENST00000587502 FRAT2O75474 233 aaPredicted RBP29.09■■■□□ 2.25
LSM7-204ENST00000587502 TRIM27P14373 513 aa29.09■■■□□ 2.25
LSM7-204ENST00000587502 NF2P35240 595 aa29.09■■■□□ 2.25
LSM7-204ENST00000587502 JAG2Q9Y219 1238 aa29.09■■■□□ 2.25
LSM7-204ENST00000587502 TBC1D22AQ8WUA7 517 aa29.08■■■□□ 2.25
LSM7-204ENST00000587502 LPIN2Q92539 896 aa29.08■■■□□ 2.25
LSM7-204ENST00000587502 CA12O43570 354 aa29.07■■■□□ 2.24
LSM7-204ENST00000587502 SLC5A1P13866 664 aa29.07■■■□□ 2.24
LSM7-204ENST00000587502 FGFR2P21802 821 aa29.07■■■□□ 2.24
LSM7-204ENST00000587502 ZNF157P51786 506 aaPredicted RBP29.07■■■□□ 2.24
LSM7-204ENST00000587502 CFAP100Q494V2 611 aa29.07■■■□□ 2.24
LSM7-204ENST00000587502 ZKSCAN2Q63HK3 967 aa29.06■■■□□ 2.24
LSM7-204ENST00000587502 ATG9AQ7Z3C6 839 aa29.06■■■□□ 2.24
LSM7-204ENST00000587502 CEP126Q9P2H0 1117 aa29.06■■■□□ 2.24
LSM7-204ENST00000587502 SPDYE2BA6NHP3 402 aa29.05■■■□□ 2.24
LSM7-204ENST00000587502 SPDYE6P0CI01 402 aa29.05■■■□□ 2.24
LSM7-204ENST00000587502 IL15P40933 162 aaPredicted RBP29.05■■■□□ 2.24
LSM7-204ENST00000587502 SERPINA10Q9UK55 444 aa29.05■■■□□ 2.24
LSM7-204ENST00000587502 SCAF8Q9UPN6 1271 aaKnown RBP29.05■■■□□ 2.24
LSM7-204ENST00000587502 PAPPA2Q9BXP8 1791 aa29.05■■■□□ 2.24
LSM7-204ENST00000587502 COL1A1P02452 1464 aaPredicted RBP29.04■■■□□ 2.24
LSM7-204ENST00000587502 RBM5P52756 815 aaKnown RBP eCLIP29.04■■■□□ 2.24
LSM7-204ENST00000587502 SIL1Q9H173 461 aa29.04■■■□□ 2.24
LSM7-204ENST00000587502 COPRSQ9NQ92 184 aa29.04■■■□□ 2.24
LSM7-204ENST00000587502 TTF2Q9UNY4 1162 aaKnown RBP29.04■■■□□ 2.24
LSM7-204ENST00000587502 PPP2R3BQ9Y5P8 575 aa29.04■■■□□ 2.24
LSM7-204ENST00000587502 BCAMP50895 628 aa29.03■■■□□ 2.24
LSM7-204ENST00000587502 LBX1P52954 281 aa29.03■■■□□ 2.24
LSM7-204ENST00000587502 FAM155AB1AL88 458 aaPredicted RBP29.02■■■□□ 2.24
LSM7-204ENST00000587502 HSPA8P11142 646 aaKnown RBP29.02■■■□□ 2.24
LSM7-204ENST00000587502 PRAMEF18Q5VWM3 479 aa29.02■■■□□ 2.24
LSM7-204ENST00000587502 DEFB129Q9H1M3 183 aa29.02■■■□□ 2.24
LSM7-204ENST00000587502 GNAI2P04899 355 aa29.01■■■□□ 2.23
LSM7-204ENST00000587502 SLC10A3P09131 477 aa29.01■■■□□ 2.23
LSM7-204ENST00000587502 CHAF1AQ13111 956 aaPredicted RBP29.01■■■□□ 2.23
LSM7-204ENST00000587502 MTX1Q13505 466 aa29.01■■■□□ 2.23
LSM7-204ENST00000587502 TTLL12Q14166 644 aaPredicted RBP29.01■■■□□ 2.23
LSM7-204ENST00000587502 CLUAP1Q96AJ1 413 aa29.01■■■□□ 2.23
LSM7-204ENST00000587502 PRMT6Q96LA8 375 aaPredicted RBP29.01■■■□□ 2.23
LSM7-204ENST00000587502 IQSEC3Q9UPP2 1182 aaPredicted RBP29.01■■■□□ 2.23
LSM7-204ENST00000587502 SUGT1Q9Y2Z0 365 aa29.01■■■□□ 2.23
LSM7-204ENST00000587502 SRGAP3O43295 1099 aa29■■■□□ 2.23
LSM7-204ENST00000587502 ATP2B3Q16720 1220 aa29■■■□□ 2.23
LSM7-204ENST00000587502 REM2Q8IYK8 340 aaPredicted RBP29■■■□□ 2.23
LSM7-204ENST00000587502 HDLBPQ00341 1268 aaKnown RBP28.99■■■□□ 2.23
LSM7-204ENST00000587502 ARMC9Q7Z3E5 817 aa28.99■■■□□ 2.23
LSM7-204ENST00000587502 GNL3LQ9NVN8 582 aaKnown RBP28.99■■■□□ 2.23
LSM7-204ENST00000587502 ECM29Q5VYK3 1845 aa28.99■■■□□ 2.23
LSM7-204ENST00000587502 TNFAIP1Q13829 316 aa28.98■■■□□ 2.23
LSM7-204ENST00000587502 MRIQ9BWK5 157 aa28.98■■■□□ 2.23
LSM7-204ENST00000587502 PA2G4Q9UQ80 394 aaKnown RBP28.98■■■□□ 2.23
LSM7-204ENST00000587502 PCDHAC2Q9Y5I4 1007 aa28.98■■■□□ 2.23
LSM7-204ENST00000587502 ARAP2Q8WZ64 1704 aa28.97■■■□□ 2.23
LSM7-204ENST00000587502 CLRN2A0PK11 232 aa28.97■■■□□ 2.23
LSM7-204ENST00000587502 FTSJ3Q8IY81 847 aaKnown RBP28.97■■■□□ 2.23
LSM7-204ENST00000587502 WDR66Q8TBY9 1149 aa28.97■■■□□ 2.23
LSM7-204ENST00000587502 VEZTQ9HBM0 779 aa28.97■■■□□ 2.23
LSM7-204ENST00000587502 MAST3O60307 1309 aa28.96■■■□□ 2.23
LSM7-204ENST00000587502 UBE2Q2LH0YL09 131 aa28.96■■■□□ 2.23
LSM7-204ENST00000587502 CRKP46108 304 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms