RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
BRCA1-225ENST00000586385 VAMP4O75379 141 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 IL1R1P14778 569 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 GJA5P36382 358 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 CAP1Q01518 475 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-225ENST00000586385 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 HTTP42858 3142 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 F6X3S4 739 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 CFAP100Q494V2 611 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-225ENST00000586385 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
BRCA1-225ENST00000586385 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-225ENST00000586385 KCNJ4P48050 445 aa15.18■□□□□ 0.02
BRCA1-225ENST00000586385 NBPF12Q5TAG4 269 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-225ENST00000586385 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
BRCA1-225ENST00000586385 MYH16Q9H6N6 1097 aa15.18■□□□□ 0.02
BRCA1-225ENST00000586385 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-225ENST00000586385 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
BRCA1-225ENST00000586385 OTOP1Q7RTM1 612 aa15.17■□□□□ 0.02
BRCA1-225ENST00000586385 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
BRCA1-225ENST00000586385 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-225ENST00000586385 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-225ENST00000586385 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
BRCA1-225ENST00000586385 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-225ENST00000586385 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-225ENST00000586385 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
BRCA1-225ENST00000586385 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
BRCA1-225ENST00000586385 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
BRCA1-225ENST00000586385 PTPN18Q99952 460 aa15.16■□□□□ 0.02
BRCA1-225ENST00000586385 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-225ENST00000586385 A0A1B0GUL6 1792 aa15.16■□□□□ 0.02
BRCA1-225ENST00000586385 ALDH1A1P00352 501 aa15.15■□□□□ 0.02
BRCA1-225ENST00000586385 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
BRCA1-225ENST00000586385 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-225ENST00000586385 INHBEP58166 350 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 CRHR2Q13324 411 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 RASA3Q14644 834 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 ZNF804AQ7Z570 1209 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 CHMP3Q9Y3E7 222 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 TRIM17Q9Y577 477 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 FAM205AQ6ZU69 1335 aa15.14■□□□□ 0.01
BRCA1-225ENST00000586385 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-225ENST00000586385 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
BRCA1-225ENST00000586385 GRIK5Q16478 980 aa15.13■□□□□ 0.01
BRCA1-225ENST00000586385 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
BRCA1-225ENST00000586385 TDRD7Q8NHU6 1098 aaKnown RBP15.13■□□□□ 0.01
BRCA1-225ENST00000586385 KAZALD1Q96I82 304 aa15.13■□□□□ 0.01
BRCA1-225ENST00000586385 LAMB1P07942 1786 aa15.13■□□□□ 0.01
BRCA1-225ENST00000586385 GRM8O00222 908 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 PLIN1O60240 522 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 SUPT20HL1Q3ZLR7 823 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 CD99L2Q8TCZ2 262 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 MS4A4AQ96JQ5 239 aa15.12■□□□□ 0.01
BRCA1-225ENST00000586385 PUS3Q9BZE2 481 aaKnown RBP15.12■□□□□ 0.01
BRCA1-225ENST00000586385 ZNF70Q9UC06 446 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-225ENST00000586385 MYO1BO43795 1136 aa15.11■□□□□ 0.01
BRCA1-225ENST00000586385 GYG1P46976 350 aa15.11■□□□□ 0.01
BRCA1-225ENST00000586385 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-225ENST00000586385 WDR63Q8IWG1 891 aa15.11■□□□□ 0.01
BRCA1-225ENST00000586385 FAM84BQ96KN1 310 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-225ENST00000586385 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
BRCA1-225ENST00000586385 PTPN22Q9Y2R2 807 aa15.11■□□□□ 0.01
BRCA1-225ENST00000586385 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-225ENST00000586385 MKI67P46013 3256 aaKnown RBP15.11■□□□□ 0.01
BRCA1-225ENST00000586385 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
BRCA1-225ENST00000586385 MFSD14BQ5SR56 506 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 ELP3Q9H9T3 547 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 ECM29Q5VYK3 1845 aa15.1■□□□□ 0.01
BRCA1-225ENST00000586385 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
BRCA1-225ENST00000586385 UBE4AQ14139 1066 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 DZIP1LQ8IYY4 767 aaKnown RBP15.09■□□□□ 0.01
BRCA1-225ENST00000586385 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 ERO1AQ96HE7 468 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
BRCA1-225ENST00000586385 RIPOR2Q9Y4F9 1068 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 OTOFQ9HC10 1997 aa15.09■□□□□ 0.01
BRCA1-225ENST00000586385 HIBADHP31937 336 aaKnown RBP15.08■□□□□ 0
BRCA1-225ENST00000586385 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
BRCA1-225ENST00000586385 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 274.5 ms