RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.25
CDK5RAP3-237ENST00000585163 NWD2Q9ULI1 1742 aa16.58■□□□□ 0.25
CDK5RAP3-237ENST00000585163 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 A0A1W2PQD8 194 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SMTNL1A8MU46 457 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TNNT1P13805 278 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 IMMTQ16891 758 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
CDK5RAP3-237ENST00000585163 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PAPPAQ13219 1627 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 LINC00301Q8NCQ3 95 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ISCA1Q9BUE6 129 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
CDK5RAP3-237ENST00000585163 DHX16O60231 1041 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 FGAP02671 866 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 A0A087WWV3 80 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ADORA1P30542 326 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 WASHC4Q2M389 1173 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 MB21D2Q8IYB1 491 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 POLR3EQ9NVU0 708 aa16.56■□□□□ 0.24
CDK5RAP3-237ENST00000585163 HAND2P61296 217 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SYCP1Q15431 976 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 HPS5Q9UPZ3 1129 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PRC1O43663 620 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 YEATS4O95619 227 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ARID5BQ14865 1188 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 KCNG4Q8TDN1 519 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 APPBP2Q92624 585 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NDUFA8P51970 172 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ERCC4Q92889 916 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SCARF1Q14162 830 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 STK38Q15208 465 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-237ENST00000585163 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SKILP12757 684 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ANTXR2P58335 489 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NCBP1Q09161 790 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TRIM28Q13263 835 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 NEDD4P46934 1319 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 WDR19Q8NEZ3 1342 aa16.53■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 SPTLC2O15270 562 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 ZAP70P43403 619 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CCZ1BP86790 482 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CCZ1P86791 482 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CCDC112Q8NEF3 446 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 BPIFA3Q9BQP9 254 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 PLA2G12BQ9BX93 195 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.24
CDK5RAP3-237ENST00000585163 CEP135Q66GS9 1140 aa16.52■□□□□ 0.23
CDK5RAP3-237ENST00000585163 NYAP1Q6ZVC0 841 aa16.52■□□□□ 0.23
CDK5RAP3-237ENST00000585163 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.23
CDK5RAP3-237ENST00000585163 RGS22Q8NE09 1264 aa16.52■□□□□ 0.23
CDK5RAP3-237ENST00000585163 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 ZNF213O14771 459 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CPLX1O14810 134 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 CSF1RP07333 972 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 KCND1Q9NSA2 647 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 GPAA1O43292 621 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 PCCAP05165 728 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 DPCR1Q3MIW9 517 aa16.51■□□□□ 0.23
CDK5RAP3-237ENST00000585163 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms