RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 RMDN2Q96LZ7 410 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 MMTAG2Q9BU76 263 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 IQCGQ9H095 443 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 DNAJC25Q9H1X3 360 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 VCPKMTQ9H867 229 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 IRAK4Q9NWZ3 460 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 RGL1Q9NZL6 768 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 TCHHQ07283 1943 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 RNF40O75150 1001 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 YY1P25490 414 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 ABCD1P33897 745 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 PEX19P40855 299 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 IRAK1P51617 712 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 PDE1AP54750 535 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 GNG11P61952 73 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.691e-7■□□□□ 9.5
SKA2-207ENST00000583380 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 ACTN3Q08043 901 aaPredicted RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 CCDC96Q2M329 555 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 LARP1BQ659C4 914 aaKnown RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 SLC30A9Q6PML9 568 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 ZNF513Q8N8E2 541 aaPredicted RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 TRIM58Q8NG06 486 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 MICAL1Q8TDZ2 1067 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 PPP1R14BQ96C90 147 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 BICD1Q96G01 975 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 TTC14Q96N46 770 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 ZNF396Q96N95 335 aaPredicted RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 BICC1Q9H694 974 aaKnown RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
SKA2-207ENST00000583380 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 MYO3AQ8NEV4 1616 aa10.72□□□□□ -0.69
SKA2-207ENST00000583380 GOLGA6CA6NDK9 693 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 ENO4A6NNW6 628 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 CUTAO60888 179 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 RASSF9O75901 435 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 GOLGA6DP0CG33 693 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 CKAP4Q07065 602 aaKnown RBP10.71□□□□□ -0.69
SKA2-207ENST00000583380 RIPK1Q13546 671 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 ARFGAP2Q8N6H7 521 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 BCAS4Q8TDM0 211 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 KAT2BQ92831 832 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 ALS2CR12Q96Q35 445 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 GOLGA6AQ9NYA3 693 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 USP16Q9Y5T5 823 aa10.71□□□□□ -0.69
SKA2-207ENST00000583380 ABCA6Q8N139 1617 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 RAPGEF6Q8TEU7 1601 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 CDHR2Q9BYE9 1310 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 FCHSD2O94868 740 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 PRPF6O94906 941 aaKnown RBP10.7□□□□□ -0.7
SKA2-207ENST00000583380 CCDC175P0C221 793 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 ZKSCAN1P17029 563 aaPredicted RBP10.7□□□□□ -0.7
SKA2-207ENST00000583380 PAX7P23759 505 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 GJB2P29033 226 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 CCT5P48643 541 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 AKAP17AQ02040 695 aaKnown RBP10.7□□□□□ -0.7
SKA2-207ENST00000583380 FAM160A1Q05DH4 1040 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 STIM1Q13586 685 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 NAA25Q14CX7 972 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 CAPRIN2Q6IMN6 1127 aaKnown RBP10.7□□□□□ -0.7
SKA2-207ENST00000583380 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 SIRT2Q8IXJ6 389 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 PARP9Q8IXQ6 854 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 OR8K1Q8NGG5 319 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 SMARCC2Q8TAQ2 1214 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 PPP2R2CQ9Y2T4 447 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 CYP46A1Q9Y6A2 500 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 SPHKAPQ2M3C7 1700 aa10.7□□□□□ -0.7
SKA2-207ENST00000583380 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
SKA2-207ENST00000583380 CTAGE9A4FU28 777 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 HIP1O00291 1037 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 NDUFAB1O14561 156 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
SKA2-207ENST00000583380 GNAI3P08754 354 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
SKA2-207ENST00000583380 CPLX2Q6PUV4 134 aaKnown RBP10.69□□□□□ -0.7
SKA2-207ENST00000583380 UBE3BQ7Z3V4 1068 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 ARHGEF25Q86VW2 580 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 CFAP61Q8NHU2 1237 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 COG1Q8WTW3 980 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 KCNB2Q92953 911 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 SPAG5Q96R06 1193 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
SKA2-207ENST00000583380 SWAP70Q9UH65 585 aa10.69□□□□□ -0.7
SKA2-207ENST00000583380 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms