RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TRIM6-TRIM34B2RNG4 842 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ECE2O60344 883 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 IGSF3O75054 1194 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 MAP4K4O95819 1239 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 SDSP20132 328 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 PRELPP51888 382 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 CNTROBQ8N137 903 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 RILPL2Q969X0 211 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 DBNDD1Q9H9R9 158 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ZNRF3Q9ULT6 936 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 AKAP11Q9UKA4 1901 aa11.13□□□□□ -0.63
CDK5RAP3-220ENST00000581160 SALL1Q9NSC2 1324 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 GOLIM4O00461 696 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 LMNB1P20700 586 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 GTF2IP78347 998 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 RASSF7Q02833 373 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TTLL5Q6EMB2 1281 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 NIM1KQ8IY84 436 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 EDC3Q96F86 508 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 NDUFB9Q9Y6M9 179 aa11.12□□□□□ -0.63
CDK5RAP3-220ENST00000581160 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 YDJCA8MPS7 323 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ZGPATQ8N5A5 531 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 PIH1D3Q9NQM4 214 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 KCNQ5Q9NR82 932 aa11.11□□□□□ -0.63
CDK5RAP3-220ENST00000581160 CHD4Q14839 1912 aa11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 FZD9O00144 591 aa11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
CDK5RAP3-220ENST00000581160 COL4A5P29400 1685 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 HIP1O00291 1037 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 RNF113AO15541 343 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 CXCL9Q07325 125 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 MAP3K12Q12852 859 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TNIP1Q15025 636 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.09□□□□□ -0.632e-14■■□□□ 13.2
CDK5RAP3-220ENST00000581160 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 JAG2Q9Y219 1238 aa11.09□□□□□ -0.63
CDK5RAP3-220ENST00000581160 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 RAD17O75943 681 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CHMLP26374 656 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CIAPIN1Q6FI81 312 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 SBF1O95248 1867 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
CDK5RAP3-220ENST00000581160 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 PSMD14O00487 310 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CDC45O75419 566 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 ADD2P35612 726 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 UBE3CQ15386 1083 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 GRIK5Q16478 980 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 SLC9C2Q5TAH2 1124 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 C9orf131Q5VYM1 1079 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CERS5Q8N5B7 392 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
CDK5RAP3-220ENST00000581160 DICER1Q9UPY3 1922 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 TCRBV5S4A2TA0A5A2 114 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 LDHCP07864 332 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 PDE6AP16499 860 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 PRDX5P30044 214 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MMP14P50281 582 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 GSTO1P78417 241 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 MECOMQ03112 1051 aa11.06□□□□□ -0.64
CDK5RAP3-220ENST00000581160 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms