RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 DOCK2Q92608 1830 aa22.3■■□□□ 1.16
PRKCA-203ENST00000578063 FRAT2O75474 233 aaPredicted RBP22.29■■□□□ 1.16
PRKCA-203ENST00000578063 SLC9C2Q5TAH2 1124 aa22.29■■□□□ 1.16
PRKCA-203ENST00000578063 TXNRD3Q86VQ6 643 aa22.29■■□□□ 1.16
PRKCA-203ENST00000578063 TBC1D16Q8TBP0 767 aa22.29■■□□□ 1.16
PRKCA-203ENST00000578063 MAP4K1Q92918 833 aa22.29■■□□□ 1.16
PRKCA-203ENST00000578063 IQSEC3Q9UPP2 1182 aaPredicted RBP22.29■■□□□ 1.16
PRKCA-203ENST00000578063 MYH7P12883 1935 aa22.28■■□□□ 1.16
PRKCA-203ENST00000578063 PDE6AP16499 860 aa22.28■■□□□ 1.16
PRKCA-203ENST00000578063 POLD1P28340 1107 aa22.28■■□□□ 1.16
PRKCA-203ENST00000578063 CHRNA5P30532 468 aa22.28■■□□□ 1.16
PRKCA-203ENST00000578063 DAXXQ9UER7 740 aaPredicted RBP22.28■■□□□ 1.16
PRKCA-203ENST00000578063 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
PRKCA-203ENST00000578063 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
PRKCA-203ENST00000578063 MPNDQ8N594 471 aa22.27■■□□□ 1.16
PRKCA-203ENST00000578063 OSBP2Q969R2 916 aa22.27■■□□□ 1.16
PRKCA-203ENST00000578063 POLLQ9UGP5 575 aa22.27■■□□□ 1.16
PRKCA-203ENST00000578063 RBM8AQ9Y5S9 174 aaKnown RBP22.27■■□□□ 1.16
PRKCA-203ENST00000578063 SLFNL1Q499Z3 407 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 LRP2BPQ9P2M1 347 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 WWC3Q9ULE0 1092 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 PALD1Q9ULE6 856 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 C6orf229H3BNL8 230 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 M0R2C6 588 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 DPP8Q6V1X1 898 aaPredicted RBP22.26■■□□□ 1.15
PRKCA-203ENST00000578063 TDRD7Q8NHU6 1098 aaKnown RBP22.26■■□□□ 1.15
PRKCA-203ENST00000578063 SNX21Q969T3 373 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
PRKCA-203ENST00000578063 ATF5Q9Y2D1 282 aaPredicted RBP22.26■■□□□ 1.15
PRKCA-203ENST00000578063 ZNF532Q9HCE3 1301 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 TCRBV5S4A2TA0A5A2 114 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 IGSF3O75054 1194 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 NECTIN1Q15223 517 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 RNF20Q5VTR2 975 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 IL27Q8NEV9 243 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 KCNB2Q92953 911 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 U3KPZ7 1027 aaPredicted RBP22.25■■□□□ 1.15
PRKCA-203ENST00000578063 DUOX1Q9NRD9 1551 aa22.25■■□□□ 1.15
PRKCA-203ENST00000578063 MAGEB6Q8N7X4 407 aa22.24■■□□□ 1.15
PRKCA-203ENST00000578063 GPR101Q96P66 508 aaPredicted RBP22.24■■□□□ 1.15
PRKCA-203ENST00000578063 ABCF2Q9UG63 623 aa22.24■■□□□ 1.15
PRKCA-203ENST00000578063 DLEC1Q9Y238 1755 aa22.24■■□□□ 1.15
PRKCA-203ENST00000578063 MYH13Q9UKX3 1938 aa22.24■■□□□ 1.15
PRKCA-203ENST00000578063 CC2D2BQ6DHV5 1058 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 TMED8Q6PL24 325 aaPredicted RBP22.23■■□□□ 1.15
PRKCA-203ENST00000578063 HSCBQ8IWL3 235 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 ZGPATQ8N5A5 531 aaKnown RBP22.23■■□□□ 1.15
PRKCA-203ENST00000578063 PUS7LQ9H0K6 701 aaKnown RBP22.23■■□□□ 1.15
PRKCA-203ENST00000578063 KIF13BQ9NQT8 1826 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 SALL1Q9NSC2 1324 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
PRKCA-203ENST00000578063 IL1R1P14778 569 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
PRKCA-203ENST00000578063 WDR66Q8TBY9 1149 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 TBC1D2Q9BYX2 928 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 CD209Q9NNX6 404 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 SNX14Q9Y5W7 946 aa22.23■■□□□ 1.15
PRKCA-203ENST00000578063 GPAA1O43292 621 aa22.22■■□□□ 1.15
PRKCA-203ENST00000578063 CHAF1AQ13111 956 aaPredicted RBP22.22■■□□□ 1.15
PRKCA-203ENST00000578063 CREB3L3Q68CJ9 461 aa22.22■■□□□ 1.15
PRKCA-203ENST00000578063 EYA3Q99504 573 aa22.22■■□□□ 1.15
PRKCA-203ENST00000578063 RAI14Q9P0K7 980 aa22.22■■□□□ 1.15
PRKCA-203ENST00000578063 ST18O60284 1047 aa22.21■■□□□ 1.15
PRKCA-203ENST00000578063 HSPD1P10809 573 aaKnown RBP22.21■■□□□ 1.15
PRKCA-203ENST00000578063 CACNA1SQ13698 1873 aa22.21■■□□□ 1.15
PRKCA-203ENST00000578063 MYO5AQ9Y4I1 1855 aaKnown RBP22.21■■□□□ 1.15
PRKCA-203ENST00000578063 SLC27A2O14975 620 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 SPTY2D1Q68D10 685 aaPredicted RBP22.2■■□□□ 1.14
PRKCA-203ENST00000578063 OLFM4Q6UX06 510 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 RASEFQ8IZ41 740 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 SLX4Q8IY92 1834 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 TGFB2P61812 414 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 GRIPAP1Q4V328 841 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 VPS53Q5VIR6 699 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 TTLL6Q8N841 843 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 AIDAQ96BJ3 306 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 ZC3H12CQ9C0D7 883 aaKnown RBP22.2■■□□□ 1.14
PRKCA-203ENST00000578063 COA1Q9GZY4 146 aa22.2■■□□□ 1.14
PRKCA-203ENST00000578063 MAST2Q6P0Q8 1798 aa22.18■■□□□ 1.14
PRKCA-203ENST00000578063 DPEP1P16444 411 aa22.18■■□□□ 1.14
PRKCA-203ENST00000578063 RTFDC1Q9BY42 306 aaPredicted RBP22.18■■□□□ 1.14
PRKCA-203ENST00000578063 CYP7A1P22680 504 aa22.17■■□□□ 1.14
PRKCA-203ENST00000578063 TSGA10IPQ3SY00 556 aa22.17■■□□□ 1.14
PRKCA-203ENST00000578063 TM6SF1Q9BZW5 370 aa22.17■■□□□ 1.14
PRKCA-203ENST00000578063 CTNNA3Q9UI47 895 aa22.17■■□□□ 1.14
PRKCA-203ENST00000578063 SNED1Q8TER0 1413 aa22.17■■□□□ 1.14
PRKCA-203ENST00000578063 NAA16Q6N069 864 aaPredicted RBP22.17■■□□□ 1.14
PRKCA-203ENST00000578063 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 MBD4O95243 580 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 SLC4A3P48751 1232 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 NEK4P51957 841 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 KRT32Q14532 448 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 NSUN4Q96CB9 384 aaKnown RBP22.16■■□□□ 1.14
PRKCA-203ENST00000578063 STRBPQ96SI9 672 aaKnown RBP22.16■■□□□ 1.14
PRKCA-203ENST00000578063 SGIP1Q9BQI5 828 aa22.16■■□□□ 1.14
PRKCA-203ENST00000578063 A0A0G2JLW4 131 aa22.15■■□□□ 1.14
PRKCA-203ENST00000578063 GNAT2P19087 354 aa22.15■■□□□ 1.14
PRKCA-203ENST00000578063 KCNA3P22001 575 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms