RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
ATPAF1-214ENST00000576409 MTX1Q13505 466 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 HLTFQ14527 1009 aaKnown RBP eCLIP20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 RNF187Q5TA31 235 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 ZNF790Q6PG37 636 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 ADKP55263 362 aaKnown RBP20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 ZNF827Q17R98 1081 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 LRRC8AQ8IWT6 810 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 GPATCH11Q8N954 259 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 DESI2Q9BSY9 194 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 POGZQ7Z3K3 1410 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 SYNMO15061 1565 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 SLC4A4Q9Y6R1 1079 aa20.44■□□□□ 0.86
ATPAF1-214ENST00000576409 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 A1BGP04217 495 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 AOX1Q06278 1338 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 SLC5A1P13866 664 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 TNRQ92752 1358 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 AKR1B10O60218 316 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 GCKRQ14397 625 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 MAP9Q49MG5 647 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 KBTBD3Q8NAB2 608 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 PLCD4Q9BRC7 762 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 VPS16Q9H269 839 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 STX8Q9UNK0 236 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 NFE2L3Q9Y4A8 694 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
ATPAF1-214ENST00000576409 ERCC3P19447 782 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 PAFAH1B1P43034 410 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 IP6K1Q92551 441 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 KCNH3Q9ULD8 1083 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 SAMD9LQ8IVG5 1584 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 ATP2C2O75185 946 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 CMTR1Q8N1G2 835 aaKnown RBP20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 PDLIM2Q96JY6 352 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 TSPY2A6NKD2 308 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 ADD1P35611 737 aaKnown RBP20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 KRBA2Q6ZNG9 492 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 HINFPQ9BQA5 517 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 UBA5Q9GZZ9 404 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 JAG2Q9Y219 1238 aa20.42■□□□□ 0.86
ATPAF1-214ENST00000576409 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 PNOCQ13519 176 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 SLFNL1Q499Z3 407 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 CCDC113Q9H0I3 377 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 TRIM75PA6NK02 468 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 NUTM2BA6NNL0 878 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 NUTM2EB1AL46 878 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 CYP7A1P22680 504 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 NUTM2AQ8IVF1 878 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 RNF41Q9H4P4 317 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 LUC7LQ9NQ29 371 aaKnown RBP20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 KCNJ14Q9UNX9 436 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 E7EWF7 191 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 IQCEQ6IPM2 695 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 TAF4BQ92750 862 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 ORAI2Q96SN7 254 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
ATPAF1-214ENST00000576409 CTAGE9A4FU28 777 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 TXLNBQ8N3L3 684 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 PRDM1O75626 825 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 CCDC178Q5BJE1 867 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 BRAPQ7Z569 592 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 BMP2KQ9NSY1 1161 aaPredicted RBP20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 KIAA1468Q9P260 1216 aa20.4■□□□□ 0.86
ATPAF1-214ENST00000576409 ZNF174Q15697 407 aa20.39■□□□□ 0.86
ATPAF1-214ENST00000576409 MAP4K1Q92918 833 aa20.39■□□□□ 0.86
ATPAF1-214ENST00000576409 PCDHA7Q9UN72 937 aa20.39■□□□□ 0.86
ATPAF1-214ENST00000576409 NDUFA8P51970 172 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 SCRN1Q12765 414 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 KRI1Q8N9T8 703 aaKnown RBP20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 NEK11Q8NG66 645 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 VWA3AA6NCI4 1184 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 GPAA1O43292 621 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 CYP21A2P08686 494 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 ARID5AQ03989 594 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 CCDC96Q2M329 555 aa20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 METTL22Q9BUU2 404 aaPredicted RBP20.39■□□□□ 0.85
ATPAF1-214ENST00000576409 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 USO1O60763 962 aaKnown RBP20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 TTF1Q15361 905 aaPredicted RBP20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 KANK3Q6NY19 840 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 IGSF22Q8N9C0 903 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 EEF2KMTQ96G04 330 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 SBNO1A3KN83 1393 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 CLIC6Q96NY7 704 aa20.38■□□□□ 0.85
ATPAF1-214ENST00000576409 GJB4Q9NTQ9 266 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms