RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SP3Q02447 781 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
PRPF8-208ENST00000573716 SUPT20HL1Q3ZLR7 823 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 PI4KAP1Q8N8J0 262 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 ARMC5Q96C12 935 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 COLQQ9Y215 455 aaPredicted RBP15.66■□□□□ 0.1
PRPF8-208ENST00000573716 HTTP42858 3142 aa15.66■□□□□ 0.1
PRPF8-208ENST00000573716 MYBBP1AQ9BQG0 1328 aaKnown RBP15.66■□□□□ 0.1
PRPF8-208ENST00000573716 LAMB1P07942 1786 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 ZNF853P0CG23 659 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 ITGA6P23229 1130 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 GJA5P36382 358 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 RBM5P52756 815 aaKnown RBP eCLIP15.65■□□□□ 0.1
PRPF8-208ENST00000573716 MAP3K11Q16584 847 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 NBPF12Q5TAG4 269 aaPredicted RBP15.65■□□□□ 0.1
PRPF8-208ENST00000573716 KSR2Q6VAB6 950 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
PRPF8-208ENST00000573716 SLC9C1Q4G0N8 1177 aa15.64■□□□□ 0.09
PRPF8-208ENST00000573716 CERS5Q8N5B7 392 aa15.64■□□□□ 0.09
PRPF8-208ENST00000573716 ELP3Q9H9T3 547 aa15.64■□□□□ 0.09
PRPF8-208ENST00000573716 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
PRPF8-208ENST00000573716 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
PRPF8-208ENST00000573716 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
PRPF8-208ENST00000573716 CEP290O15078 2479 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 SNAP23O00161 211 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 CAP1Q01518 475 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
PRPF8-208ENST00000573716 CHRNDQ07001 517 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 ANKRD13AQ8IZ07 590 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 HELBQ8NG08 1087 aaPredicted RBP15.63■□□□□ 0.09
PRPF8-208ENST00000573716 PTPN18Q99952 460 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 OTOFQ9HC10 1997 aa15.63■□□□□ 0.09
PRPF8-208ENST00000573716 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 TAF5LO75529 589 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 USP2O75604 605 aaPredicted RBP15.62■□□□□ 0.09
PRPF8-208ENST00000573716 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 OPTNQ96CV9 577 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 ZNF333Q96JL9 665 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 PRMT6Q96LA8 375 aaPredicted RBP15.62■□□□□ 0.09
PRPF8-208ENST00000573716 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 AOX1Q06278 1338 aa15.62■□□□□ 0.09
PRPF8-208ENST00000573716 CENPFP49454 3210 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 TRIOBPQ9H2D6 2365 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 APAF1O14727 1248 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 RASA3Q14644 834 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 ARHGEF6Q15052 776 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 TAF1CQ15572 869 aaPredicted RBP15.61■□□□□ 0.09
PRPF8-208ENST00000573716 MTMR14Q8NCE2 650 aa15.61■□□□□ 0.09
PRPF8-208ENST00000573716 UNCXA6NJT0 531 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 H0YGN5 161 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 H7C1W4 665 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 ZNF804AQ7Z570 1209 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 ZFYVE28Q9HCC9 887 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
PRPF8-208ENST00000573716 CCL15-CCL14A0A0B4J2E2 113 aa15.59■□□□□ 0.09
PRPF8-208ENST00000573716 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
PRPF8-208ENST00000573716 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
PRPF8-208ENST00000573716 CCL15Q16663 113 aa15.59■□□□□ 0.09
PRPF8-208ENST00000573716 A0A1B0GUL6 1792 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
PRPF8-208ENST00000573716 PLIN1O60240 522 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 GCKRQ14397 625 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 G2E3Q7L622 706 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 SH3TC2Q8TF17 1288 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 BRI3BPQ8WY22 251 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 ZSWIM8A7E2V4 1837 aa15.58■□□□□ 0.08
PRPF8-208ENST00000573716 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
PRPF8-208ENST00000573716 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
PRPF8-208ENST00000573716 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
PRPF8-208ENST00000573716 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
PRPF8-208ENST00000573716 OTUD5Q96G74 571 aa15.57■□□□□ 0.08
PRPF8-208ENST00000573716 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
PRPF8-208ENST00000573716 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
PRPF8-208ENST00000573716 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 WDHD1O75717 1129 aaPredicted RBP15.56■□□□□ 0.08
PRPF8-208ENST00000573716 IL1R1P14778 569 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 GTF2A2P52657 109 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 KIF22Q14807 665 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 MS4A4AQ96JQ5 239 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 PLA2G12BQ9BX93 195 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 TDRD3Q9H7E2 651 aaKnown RBP15.56■□□□□ 0.08
PRPF8-208ENST00000573716 CSADQ9Y600 493 aa15.56■□□□□ 0.08
PRPF8-208ENST00000573716 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 CSF1RP07333 972 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 IFIT5Q13325 482 aaKnown RBP15.55■□□□□ 0.08
PRPF8-208ENST00000573716 VGLL4Q14135 290 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-208ENST00000573716 FAM43AQ8N2R8 423 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms