RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 WNK4Q96J92 1243 aa16.37■□□□□ 0.21
RNF40-208ENST00000565995 TESPA1A2RU30 521 aaPredicted RBP16.36■□□□□ 0.21
RNF40-208ENST00000565995 IGF2BP3O00425 579 aaKnown RBP eCLIP16.36■□□□□ 0.21
RNF40-208ENST00000565995 PPP1R12BO60237 982 aaPredicted RBP16.36■□□□□ 0.21
RNF40-208ENST00000565995 IL1R1P14778 569 aa16.36■□□□□ 0.21
RNF40-208ENST00000565995 CHRNDQ07001 517 aa16.36■□□□□ 0.21
RNF40-208ENST00000565995 DLGAP5Q15398 846 aa16.36■□□□□ 0.21
RNF40-208ENST00000565995 CERS5Q8N5B7 392 aa16.36■□□□□ 0.21
RNF40-208ENST00000565995 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
RNF40-208ENST00000565995 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
RNF40-208ENST00000565995 G2E3Q7L622 706 aa16.35■□□□□ 0.21
RNF40-208ENST00000565995 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
RNF40-208ENST00000565995 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
RNF40-208ENST00000565995 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
RNF40-208ENST00000565995 TRIM17Q9Y577 477 aa16.35■□□□□ 0.21
RNF40-208ENST00000565995 SUPT20HL1Q3ZLR7 823 aa16.34■□□□□ 0.21
RNF40-208ENST00000565995 ARMC5Q96C12 935 aa16.34■□□□□ 0.21
RNF40-208ENST00000565995 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
RNF40-208ENST00000565995 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
RNF40-208ENST00000565995 CEP290O15078 2479 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 USP2O75604 605 aaPredicted RBP16.33■□□□□ 0.2
RNF40-208ENST00000565995 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 CCDC27Q2M243 656 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 HABP4Q5JVS0 413 aaKnown RBP16.33■□□□□ 0.2
RNF40-208ENST00000565995 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
RNF40-208ENST00000565995 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
RNF40-208ENST00000565995 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
RNF40-208ENST00000565995 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
RNF40-208ENST00000565995 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
RNF40-208ENST00000565995 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
RNF40-208ENST00000565995 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 MYO1BO43795 1136 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 GJA5P36382 358 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 KCNJ4P48050 445 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 IREB2P48200 963 aaKnown RBP16.31■□□□□ 0.2
RNF40-208ENST00000565995 CRHR2Q13324 411 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
RNF40-208ENST00000565995 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
RNF40-208ENST00000565995 NBPF12Q5TAG4 269 aaPredicted RBP16.31■□□□□ 0.2
RNF40-208ENST00000565995 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 PTPN18Q99952 460 aa16.31■□□□□ 0.2
RNF40-208ENST00000565995 FOXO4P98177 505 aa16.3■□□□□ 0.2
RNF40-208ENST00000565995 FLIIQ13045 1269 aa16.3■□□□□ 0.2
RNF40-208ENST00000565995 DNAAF4Q8WXU2 420 aa16.3■□□□□ 0.2
RNF40-208ENST00000565995 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
RNF40-208ENST00000565995 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
RNF40-208ENST00000565995 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
RNF40-208ENST00000565995 MGAMO43451 1857 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 AOX1Q06278 1338 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 IL16Q14005 1332 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 FAM205AQ6ZU69 1335 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 SNAP23O00161 211 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 TAF5LO75529 589 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 CAP1Q01518 475 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 SP3Q02447 781 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 CD99L2Q8TCZ2 262 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
RNF40-208ENST00000565995 RASA3Q14644 834 aa16.28■□□□□ 0.2
RNF40-208ENST00000565995 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
RNF40-208ENST00000565995 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
RNF40-208ENST00000565995 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
RNF40-208ENST00000565995 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
RNF40-208ENST00000565995 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
RNF40-208ENST00000565995 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
RNF40-208ENST00000565995 TEPSINQ96N21 525 aa16.27■□□□□ 0.2
RNF40-208ENST00000565995 SZT2Q5T011 3432 aa16.26■□□□□ 0.19
RNF40-208ENST00000565995 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
RNF40-208ENST00000565995 EN2P19622 333 aaPredicted RBP16.26■□□□□ 0.19
RNF40-208ENST00000565995 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
RNF40-208ENST00000565995 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
RNF40-208ENST00000565995 ZNF333Q96JL9 665 aa16.26■□□□□ 0.19
RNF40-208ENST00000565995 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
RNF40-208ENST00000565995 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
RNF40-208ENST00000565995 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
RNF40-208ENST00000565995 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
RNF40-208ENST00000565995 VEZTQ9HBM0 779 aa16.25■□□□□ 0.19
RNF40-208ENST00000565995 ZNF70Q9UC06 446 aaPredicted RBP16.25■□□□□ 0.19
RNF40-208ENST00000565995 VAMP4O75379 141 aa16.24■□□□□ 0.19
RNF40-208ENST00000565995 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
RNF40-208ENST00000565995 BEND3Q5T5X7 828 aa16.24■□□□□ 0.19
RNF40-208ENST00000565995 FXR1P51114 621 aaKnown RBP eCLIP16.23■□□□□ 0.19
RNF40-208ENST00000565995 GTF2A2P52657 109 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 UBE4AQ14139 1066 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 LDHAL6AQ6ZMR3 332 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 ELP3Q9H9T3 547 aa16.23■□□□□ 0.19
RNF40-208ENST00000565995 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
RNF40-208ENST00000565995 TRIOBPQ9H2D6 2365 aa16.22■□□□□ 0.19
RNF40-208ENST00000565995 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
RNF40-208ENST00000565995 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
RNF40-208ENST00000565995 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
RNF40-208ENST00000565995 MFSD14BQ5SR56 506 aa16.22■□□□□ 0.19
RNF40-208ENST00000565995 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms